RNA–Protein interactions for RNA: ENST00000436564.5

COPS7B-212, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-212ENST00000436564 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
COPS7B-212ENST00000436564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.8□□□□□ -0.2
COPS7B-212ENST00000436564 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
COPS7B-212ENST00000436564 TSR2Q969E8 191 aaKnown RBP13.8□□□□□ -0.2
COPS7B-212ENST00000436564 TEPSINQ96N21 525 aa13.8□□□□□ -0.2
COPS7B-212ENST00000436564 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
COPS7B-212ENST00000436564 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
COPS7B-212ENST00000436564 ZNF646O15015 1829 aaPredicted RBP13.8□□□□□ -0.2
COPS7B-212ENST00000436564 FLIIQ13045 1269 aa13.79□□□□□ -0.2
COPS7B-212ENST00000436564 LDHAL6AQ6ZMR3 332 aa13.79□□□□□ -0.2
COPS7B-212ENST00000436564 CNNM1Q9NRU3 951 aa13.79□□□□□ -0.2
COPS7B-212ENST00000436564 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
COPS7B-212ENST00000436564 BOLA1Q9Y3E2 137 aa13.79□□□□□ -0.2
COPS7B-212ENST00000436564 FAM205AQ6ZU69 1335 aa13.79□□□□□ -0.2
COPS7B-212ENST00000436564 RANBP2P49792 3224 aaKnown RBP13.79□□□□□ -0.2
COPS7B-212ENST00000436564 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
COPS7B-212ENST00000436564 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
COPS7B-212ENST00000436564 CRKP46108 304 aa13.78□□□□□ -0.2
COPS7B-212ENST00000436564 SNAPC2Q13487 334 aa13.78□□□□□ -0.2
COPS7B-212ENST00000436564 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
COPS7B-212ENST00000436564 FBXO22Q8NEZ5 403 aa13.78□□□□□ -0.2
COPS7B-212ENST00000436564 NKX2-3Q8TAU0 364 aa13.78□□□□□ -0.2
COPS7B-212ENST00000436564 ZCCHC17Q9NP64 241 aaKnown RBP13.78□□□□□ -0.2
COPS7B-212ENST00000436564 BTBD19C9JJ37 291 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 HOXD10P28358 340 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 HIBADHP31937 336 aaKnown RBP13.77□□□□□ -0.21
COPS7B-212ENST00000436564 FOXO4P98177 505 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 MTFR1Q15390 333 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 ERO1BQ86YB8 467 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 SLC17A8Q8NDX2 589 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 TDRD7Q8NHU6 1098 aaKnown RBP13.77□□□□□ -0.21
COPS7B-212ENST00000436564 WRNIP1Q96S55 665 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 HTATIP2Q9BUP3 242 aa13.77□□□□□ -0.21
COPS7B-212ENST00000436564 DLL1O00548 723 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 IRF6O14896 467 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 PSMC4P43686 418 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 GYG1P46976 350 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 SHISA4Q96DD7 197 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
COPS7B-212ENST00000436564 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
COPS7B-212ENST00000436564 SNCAIPQ9Y6H5 919 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
COPS7B-212ENST00000436564 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-212ENST00000436564 GRK4P32298 578 aa13.75□□□□□ -0.21
COPS7B-212ENST00000436564 UBE4AQ14139 1066 aa13.75□□□□□ -0.21
COPS7B-212ENST00000436564 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
COPS7B-212ENST00000436564 ZKSCAN4Q969J2 545 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-212ENST00000436564 HOOK2Q96ED9 719 aa13.75□□□□□ -0.21
COPS7B-212ENST00000436564 BIN2Q9UBW5 565 aaPredicted RBP13.75□□□□□ -0.21
COPS7B-212ENST00000436564 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
COPS7B-212ENST00000436564 CPA4Q9UI42 421 aa13.75□□□□□ -0.21
COPS7B-212ENST00000436564 NR2E3Q9Y5X4 410 aa13.75□□□□□ -0.21
COPS7B-212ENST00000436564 FRAT2O75474 233 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-212ENST00000436564 GJA8P48165 433 aa13.74□□□□□ -0.21
COPS7B-212ENST00000436564 CACNB3P54284 484 aa13.74□□□□□ -0.21
COPS7B-212ENST00000436564 PPIL2Q13356 520 aa13.74□□□□□ -0.21
COPS7B-212ENST00000436564 C17orf99Q6UX52 265 aa13.74□□□□□ -0.21
COPS7B-212ENST00000436564 FAM84BQ96KN1 310 aaPredicted RBP13.74□□□□□ -0.21
COPS7B-212ENST00000436564 TRIM47Q96LD4 638 aa13.74□□□□□ -0.21
COPS7B-212ENST00000436564 TMOD2Q9NZR1 351 aa13.74□□□□□ -0.21
COPS7B-212ENST00000436564 RIPOR2Q9Y4F9 1068 aa13.74□□□□□ -0.21
COPS7B-212ENST00000436564 GJB1P08034 283 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 CCL5P13501 91 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 OSBPP22059 807 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 UBXN2AP68543 259 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 PPATQ06203 517 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 TEKT1Q969V4 418 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 RNF208Q9H0X6 261 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 TRIOBPQ9H2D6 2365 aa13.73□□□□□ -0.21
COPS7B-212ENST00000436564 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 PDHXO00330 501 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 CTGFP29279 349 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 HDLBPQ00341 1268 aaKnown RBP13.72□□□□□ -0.21
COPS7B-212ENST00000436564 CHAF1AQ13111 956 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-212ENST00000436564 EPHA10Q5JZY3 1008 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-212ENST00000436564 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-212ENST00000436564 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-212ENST00000436564 LAMB1P07942 1786 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 MYH3P11055 1940 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 A0A0C4DFX4 3053 aa13.72□□□□□ -0.21
COPS7B-212ENST00000436564 F6X3S4 739 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 GRM8O00222 908 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 GRIK5Q16478 980 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 BEND3Q5T5X7 828 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 MIGA2Q7L4E1 593 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 UBE2Q1Q7Z7E8 422 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 ANKRD23Q86SG2 305 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 FAM83AQ86UY5 434 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 ZNF341Q9BYN7 854 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 PRO3102Q9H379 93 aa13.71□□□□□ -0.21
COPS7B-212ENST00000436564 C9orf78Q9NZ63 289 aaPredicted RBP13.71□□□□□ -0.21
COPS7B-212ENST00000436564 FARP2O94887 1054 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-212ENST00000436564 CCDC27Q2M243 656 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms