RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 IFIT1BQ5T764 474 aaKnown RBP14.12□□□□□ -0.15
CLDN4-203ENST00000435050 CYB5R4Q7L1T6 521 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 PDILTQ8N807 584 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 MINPP1Q9UNW1 487 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 USP17L12C9JPN9 530 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 USP17L21D6R901 530 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 GNAT2P19087 354 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 QTRT2Q9H974 415 aaKnown RBP14.12□□□□□ -0.15
CLDN4-203ENST00000435050 CATIPQ7Z7H3 387 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 TTC12Q9H892 705 aaPredicted RBP14.12□□□□□ -0.15
CLDN4-203ENST00000435050 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 KCNJ14Q9UNX9 436 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 MRC1P22897 1456 aa14.12□□□□□ -0.15
CLDN4-203ENST00000435050 ST5P78524 1137 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 AFF2P51816 1311 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 RPS6KA4O75676 772 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 UFL1O94874 794 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 TPM4P67936 248 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 FAM47AQ5JRC9 791 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 SPTLC2O15270 562 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 EXOSC10Q01780 885 aaKnown RBP14.11□□□□□ -0.15
CLDN4-203ENST00000435050 PPARAQ07869 468 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 FILIP1Q7Z7B0 1213 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 SAP30BPQ9UHR5 308 aaKnown RBP14.11□□□□□ -0.15
CLDN4-203ENST00000435050 NEDD4P46934 1319 aa14.11□□□□□ -0.15
CLDN4-203ENST00000435050 CCDC196A0A1B0GTZ2 297 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 CLEC4GQ6UXB4 293 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 CTCFLQ8NI51 663 aaPredicted RBP14.1□□□□□ -0.15
CLDN4-203ENST00000435050 TMEM87BQ96K49 555 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 ANKRD2Q9GZV1 360 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 SENP2Q9HC62 589 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 TNS2Q63HR2 1409 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 SCN11AQ9UI33 1791 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 KRT40Q6A162 431 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 APOA5Q6Q788 366 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 CARMIL3Q8ND23 1372 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 C5P01031 1676 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 SMC2O95347 1197 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 RESTQ13127 1097 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 UBE4AQ14139 1066 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 VPS72Q15906 364 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 SPECC1Q5M775 1068 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
CLDN4-203ENST00000435050 BRMS1Q9HCU9 246 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 NARFQ9UHQ1 456 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 RFX7Q2KHR2 1363 aa14.1□□□□□ -0.15
CLDN4-203ENST00000435050 LDHBP07195 334 aaKnown RBP14.09□□□□□ -0.15
CLDN4-203ENST00000435050 MRPS27Q92552 414 aaKnown RBP14.09□□□□□ -0.15
CLDN4-203ENST00000435050 WASF1Q92558 559 aa14.09□□□□□ -0.15
CLDN4-203ENST00000435050 ZNF622Q969S3 477 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLDN4-203ENST00000435050 KLRK1P26718 216 aa14.09□□□□□ -0.15
CLDN4-203ENST00000435050 RBM5P52756 815 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLDN4-203ENST00000435050 MB21D2Q8IYB1 491 aaPredicted RBP14.09□□□□□ -0.15
CLDN4-203ENST00000435050 ARID4AP29374 1257 aaPredicted RBP14.09□□□□□ -0.15
CLDN4-203ENST00000435050 PRDX5P30044 214 aa14.09□□□□□ -0.15
CLDN4-203ENST00000435050 ZNF804BA4D1E1 1349 aa14.09□□□□□ -0.15
CLDN4-203ENST00000435050 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.15
CLDN4-203ENST00000435050 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.15
CLDN4-203ENST00000435050 CLIC4Q9Y696 253 aa14.08□□□□□ -0.15
CLDN4-203ENST00000435050 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
CLDN4-203ENST00000435050 BSDC1Q9NW68 430 aaPredicted RBP14.08□□□□□ -0.16
CLDN4-203ENST00000435050 KCPQ6ZWJ8 1503 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 CTDNEP1O95476 244 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 ANTXR2P58335 489 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 MSL1Q68DK7 614 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 CEP57L1Q8IYX8 460 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 TULP1O00294 542 aaPredicted RBP14.08□□□□□ -0.16
CLDN4-203ENST00000435050 HSPA1LP34931 641 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 PICALMQ13492 652 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 ZNF592Q92610 1267 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 NAT10Q9H0A0 1025 aaKnown RBP14.08□□□□□ -0.16
CLDN4-203ENST00000435050 VAT1LQ9HCJ6 419 aa14.08□□□□□ -0.16
CLDN4-203ENST00000435050 PDE4BQ07343 736 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 FBXO18Q8NFZ0 1043 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 GSG1L2A8MUP6 293 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 HSP90AA4PQ58FG1 418 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 MYSM1Q5VVJ2 828 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 PGBD1Q96JS3 809 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 AFDNP55196 1824 aaKnown RBP14.07□□□□□ -0.16
CLDN4-203ENST00000435050 USP54Q70EL1 1684 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 SH2B2O14492 632 aaPredicted RBP14.07□□□□□ -0.16
CLDN4-203ENST00000435050 DIXDC1Q155Q3 683 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 SPTY2D1Q68D10 685 aaPredicted RBP14.07□□□□□ -0.16
CLDN4-203ENST00000435050 FAM84BQ96KN1 310 aaPredicted RBP14.07□□□□□ -0.16
CLDN4-203ENST00000435050 TRPC5Q9UL62 973 aaPredicted RBP14.07□□□□□ -0.16
CLDN4-203ENST00000435050 JCADQ9P266 1359 aa14.07□□□□□ -0.16
CLDN4-203ENST00000435050 TNKSO95271 1327 aa14.06□□□□□ -0.16
CLDN4-203ENST00000435050 ZNF804AQ7Z570 1209 aa14.06□□□□□ -0.16
CLDN4-203ENST00000435050 KCNG4Q8TDN1 519 aa14.06□□□□□ -0.16
CLDN4-203ENST00000435050 EPB41L4AQ9HCS5 686 aaPredicted RBP14.06□□□□□ -0.16
CLDN4-203ENST00000435050 V9GY48 417 aaPredicted RBP14.06□□□□□ -0.16
CLDN4-203ENST00000435050 BAG3O95817 575 aa14.06□□□□□ -0.16
CLDN4-203ENST00000435050 CDK11BP21127 795 aaKnown RBP14.06□□□□□ -0.16
CLDN4-203ENST00000435050 MAPKAPK5Q8IW41 473 aa14.06□□□□□ -0.16
CLDN4-203ENST00000435050 DIS3L2Q8IYB7 885 aaKnown RBP14.06□□□□□ -0.16
CLDN4-203ENST00000435050 ZNF654Q8IZM8 581 aa14.06□□□□□ -0.16
CLDN4-203ENST00000435050 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms