RNA–Protein interactions for RNA: ENST00000434266.1

EPHA4-207, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 617 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-207ENST00000434266 CHRNDQ07001 517 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 ATP2B3Q16720 1220 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 MORN1Q5T089 497 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 CC2D2BQ6DHV5 1058 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.38□□□□□ -0.91
EPHA4-207ENST00000434266 ZNF512BQ96KM6 892 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-207ENST00000434266 PODXL2Q9NZ53 605 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 LEMD3Q9Y2U8 911 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 CD2APQ9Y5K6 639 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 DDX60Q8IY21 1712 aaKnown RBP9.38□□□□□ -0.91
EPHA4-207ENST00000434266 MYH3P11055 1940 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 CHD4Q14839 1912 aa9.38□□□□□ -0.91
EPHA4-207ENST00000434266 EIF5BO60841 1220 aaKnown RBP9.37□□□□□ -0.91
EPHA4-207ENST00000434266 IFIT1P09914 478 aaKnown RBP9.37□□□□□ -0.91
EPHA4-207ENST00000434266 SLC5A1P13866 664 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 TIMM10P62072 90 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 QPCTQ16769 361 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 CCDC158Q5M9N0 1113 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 TTC22Q5TAA0 569 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 IFFO2Q5TF58 517 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 C15orf52Q6ZUT6 534 aaKnown RBP9.37□□□□□ -0.91
EPHA4-207ENST00000434266 C2CD5Q86YS7 1000 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 OTUD7AQ8TE49 926 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-207ENST00000434266 NEUROD6Q96NK8 337 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 TMX4Q9H1E5 349 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-207ENST00000434266 DBNLQ9UJU6 430 aaKnown RBP9.37□□□□□ -0.91
EPHA4-207ENST00000434266 ATP6V0A2Q9Y487 856 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-207ENST00000434266 C10orf71Q711Q0 1435 aa9.37□□□□□ -0.91
EPHA4-207ENST00000434266 XDHP47989 1333 aa9.36□□□□□ -0.91
EPHA4-207ENST00000434266 RFC5P40937 340 aa9.36□□□□□ -0.91
EPHA4-207ENST00000434266 PUS10Q3MIT2 529 aaKnown RBP9.36□□□□□ -0.91
EPHA4-207ENST00000434266 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
EPHA4-207ENST00000434266 XAGE2Q96GT9 111 aa9.36□□□□□ -0.91
EPHA4-207ENST00000434266 CCDC8Q9H0W5 538 aaPredicted RBP9.36□□□□□ -0.91
EPHA4-207ENST00000434266 IGSF3O75054 1194 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 UQCRFS1P1P0C7P4 283 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 ATP2B4P23634 1241 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 MTMR2Q13614 643 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 Q3C1V9 767 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 GORABQ5T7V8 394 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 SKAP1Q86WV1 359 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 HELBQ8NG08 1087 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-207ENST00000434266 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.91
EPHA4-207ENST00000434266 DBNDD2Q9BQY9 259 aa9.35□□□□□ -0.91
EPHA4-207ENST00000434266 ZNF804BA4D1E1 1349 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 ZNF609O15014 1411 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 SPDYE5A6NIY4 337 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 PPEF1O14829 653 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-207ENST00000434266 NR1I2O75469 434 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 TAF5LO75529 589 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 KCNA3P22001 575 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 CAVIN4Q5BKX8 364 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 SOGA3Q5TF21 947 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 FBXO33Q7Z6M2 555 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 TTLL6Q8N841 843 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 C7orf43Q8WVR3 580 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 EVI5LQ96CN4 794 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 HAUS7Q99871 368 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 GNL3LQ9NVN8 582 aaKnown RBP9.34□□□□□ -0.91
EPHA4-207ENST00000434266 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 SLC27A5Q9Y2P5 690 aa9.34□□□□□ -0.91
EPHA4-207ENST00000434266 C6orf229H3BNL8 230 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
EPHA4-207ENST00000434266 SDSP20132 328 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 ARID4AP29374 1257 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-207ENST00000434266 KCNJ4P48050 445 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 PTPN5P54829 565 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 TMEM259Q4ZIN3 620 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 CCDC102BQ68D86 513 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 CNTROBQ8N137 903 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 MPNDQ8N594 471 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 FAM84BQ96KN1 310 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-207ENST00000434266 TLR7Q9NYK1 1049 aaKnown RBP9.33□□□□□ -0.92
EPHA4-207ENST00000434266 PIM2Q9P1W9 311 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 NSFL1CQ9UNZ2 370 aaKnown RBP9.33□□□□□ -0.92
EPHA4-207ENST00000434266 UTRNP46939 3433 aa9.33□□□□□ -0.92
EPHA4-207ENST00000434266 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
EPHA4-207ENST00000434266 HIP1O00291 1037 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 DPEP1P16444 411 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 CHRNA5P30532 468 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 ADORA1P30542 326 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 GPSM2P81274 684 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 LRRFIP1Q32MZ4 808 aaKnown RBP9.32□□□□□ -0.92
EPHA4-207ENST00000434266 TTC39AQ5SRH9 613 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 PRPF40BQ6NWY9 871 aaKnown RBP9.32□□□□□ -0.92
EPHA4-207ENST00000434266 TMED8Q6PL24 325 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-207ENST00000434266 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 SPNS2Q8IVW8 549 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 RTFDC1Q9BY42 306 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-207ENST00000434266 BCL11AQ9H165 835 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 VPS33BQ9H267 617 aa9.32□□□□□ -0.92
EPHA4-207ENST00000434266 PDS5AQ29RF7 1337 aaKnown RBP9.31□□□□□ -0.92
EPHA4-207ENST00000434266 IRS2Q9Y4H2 1338 aa9.31□□□□□ -0.92
EPHA4-207ENST00000434266 A0A0G2JLW4 131 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms