RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CBLL1Q75N03 491 aa7.78□□□□□ -1.16
PTPN4-205ENST00000433888 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
PTPN4-205ENST00000433888 ALKBH8Q96BT7 664 aaKnown RBP7.78□□□□□ -1.16
PTPN4-205ENST00000433888 ZNF765Q7L2R6 523 aa7.77□□□□□ -1.17
PTPN4-205ENST00000433888 CSRNP1Q96S65 589 aa7.77□□□□□ -1.17
PTPN4-205ENST00000433888 ZC3H7BQ9UGR2 993 aaKnown RBP7.77□□□□□ -1.17
PTPN4-205ENST00000433888 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
PTPN4-205ENST00000433888 GRM2Q14416 872 aa7.76□□□□□ -1.17
PTPN4-205ENST00000433888 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
PTPN4-205ENST00000433888 EPS8L3Q8TE67 593 aaKnown RBP7.76□□□□□ -1.17
PTPN4-205ENST00000433888 WDR89Q96FK6 387 aaPredicted RBP7.76□□□□□ -1.17
PTPN4-205ENST00000433888 RBCK1Q9BYM8 510 aa7.76□□□□□ -1.17
PTPN4-205ENST00000433888 CCDC86Q9H6F5 360 aaKnown RBP7.76□□□□□ -1.17
PTPN4-205ENST00000433888 BSDC1Q9NW68 430 aaPredicted RBP7.76□□□□□ -1.17
PTPN4-205ENST00000433888 AP4E1Q9UPM8 1137 aa7.76□□□□□ -1.17
PTPN4-205ENST00000433888 RNF114Q9Y508 228 aa7.76□□□□□ -1.17
PTPN4-205ENST00000433888 LIG1P18858 919 aa7.75□□□□□ -1.17
PTPN4-205ENST00000433888 DUSP27Q5VZP5 1158 aa7.75□□□□□ -1.17
PTPN4-205ENST00000433888 OGFOD3Q6PK18 319 aa7.75□□□□□ -1.17
PTPN4-205ENST00000433888 RETREG2Q8NC44 543 aa7.75□□□□□ -1.17
PTPN4-205ENST00000433888 FBXL18Q96ME1 805 aa7.75□□□□□ -1.17
PTPN4-205ENST00000433888 CRIM1Q9NZV1 1036 aa7.75□□□□□ -1.17
PTPN4-205ENST00000433888 ANGEL1Q9UNK9 670 aaKnown RBP7.75□□□□□ -1.17
PTPN4-205ENST00000433888 PCDHGC5Q9Y5F6 944 aa7.75□□□□□ -1.17
PTPN4-205ENST00000433888 ZNF862O60290 1169 aa7.74□□□□□ -1.17
PTPN4-205ENST00000433888 GADD45BO75293 160 aaPredicted RBP7.74□□□□□ -1.17
PTPN4-205ENST00000433888 ZNF157P51786 506 aaPredicted RBP7.74□□□□□ -1.17
PTPN4-205ENST00000433888 CYP27A1Q02318 531 aa7.74□□□□□ -1.17
PTPN4-205ENST00000433888 PDE3AQ14432 1141 aa7.74□□□□□ -1.17
PTPN4-205ENST00000433888 DMRTB1Q96MA1 342 aa7.74□□□□□ -1.17
PTPN4-205ENST00000433888 TRAK1Q9UPV9 953 aa7.74□□□□□ -1.17
PTPN4-205ENST00000433888 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
PTPN4-205ENST00000433888 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
PTPN4-205ENST00000433888 KIF4BQ2VIQ3 1234 aa7.72□□□□□ -1.17
PTPN4-205ENST00000433888 PDZD3Q86UT5 571 aa7.72□□□□□ -1.17
PTPN4-205ENST00000433888 TMC1Q8TDI8 760 aa7.72□□□□□ -1.17
PTPN4-205ENST00000433888 PAK6Q9NQU5 681 aaPredicted RBP7.72□□□□□ -1.17
PTPN4-205ENST00000433888 DISC1Q9NRI5 854 aa7.72□□□□□ -1.17
PTPN4-205ENST00000433888 KRT82Q9NSB4 513 aa7.72□□□□□ -1.17
PTPN4-205ENST00000433888 DAGLAQ9Y4D2 1042 aa7.72□□□□□ -1.17
PTPN4-205ENST00000433888 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.18
PTPN4-205ENST00000433888 PI16Q6UXB8 463 aa7.71□□□□□ -1.18
PTPN4-205ENST00000433888 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
PTPN4-205ENST00000433888 FANCD2OSQ96PS1 177 aa7.71□□□□□ -1.18
PTPN4-205ENST00000433888 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
PTPN4-205ENST00000433888 LGR6Q9HBX8 967 aa7.71□□□□□ -1.18
PTPN4-205ENST00000433888 LRRC4CQ9HCJ2 640 aa7.71□□□□□ -1.18
PTPN4-205ENST00000433888 ITGB5P18084 799 aa7.7□□□□□ -1.18
PTPN4-205ENST00000433888 FCGRTP55899 365 aa7.7□□□□□ -1.18
PTPN4-205ENST00000433888 DSC3Q14574 896 aa7.7□□□□□ -1.18
PTPN4-205ENST00000433888 TMC7Q7Z402 723 aa7.7□□□□□ -1.18
PTPN4-205ENST00000433888 TP53INP2Q8IXH6 220 aa7.7□□□□□ -1.18
PTPN4-205ENST00000433888 SLFN14P0C7P3 912 aa7.69□□□□□ -1.18
PTPN4-205ENST00000433888 ID3Q02535 119 aa7.69□□□□□ -1.18
PTPN4-205ENST00000433888 STK35Q8TDR2 534 aa7.69□□□□□ -1.18
PTPN4-205ENST00000433888 BCL7CQ8WUZ0 217 aaPredicted RBP7.69□□□□□ -1.18
PTPN4-205ENST00000433888 ARID3AQ99856 593 aa7.69□□□□□ -1.18
PTPN4-205ENST00000433888 GNEQ9Y223 722 aaKnown RBP7.69□□□□□ -1.18
PTPN4-205ENST00000433888 BTBD11A6QL63 1104 aa7.68□□□□□ -1.18
PTPN4-205ENST00000433888 PDE4CQ08493 712 aa7.68□□□□□ -1.18
PTPN4-205ENST00000433888 DTHD1Q6ZMT9 781 aa7.68□□□□□ -1.18
PTPN4-205ENST00000433888 FLCNQ8NFG4 579 aa7.68□□□□□ -1.18
PTPN4-205ENST00000433888 BCO2Q9BYV7 579 aa7.68□□□□□ -1.18
PTPN4-205ENST00000433888 ATXN3LQ9H3M9 355 aa7.68□□□□□ -1.18
PTPN4-205ENST00000433888 TMEM39AQ9NV64 488 aa7.68□□□□□ -1.18
PTPN4-205ENST00000433888 XRCC5P13010 732 aaKnown RBP7.67□□□□□ -1.18
PTPN4-205ENST00000433888 YBX3P16989 372 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTPN4-205ENST00000433888 CDK5R2Q13319 367 aa7.67□□□□□ -1.18
PTPN4-205ENST00000433888 CYP27C1Q4G0S4 372 aa7.67□□□□□ -1.18
PTPN4-205ENST00000433888 SPRED2Q7Z698 418 aa7.67□□□□□ -1.18
PTPN4-205ENST00000433888 SMYD4Q8IYR2 804 aaPredicted RBP7.67□□□□□ -1.18
PTPN4-205ENST00000433888 AGBL5Q8NDL9 886 aa7.67□□□□□ -1.18
PTPN4-205ENST00000433888 TTLL4Q14679 1199 aa7.66□□□□□ -1.18
PTPN4-205ENST00000433888 ZNF574Q6ZN55 896 aaPredicted RBP7.66□□□□□ -1.18
PTPN4-205ENST00000433888 NLRP2Q9NX02 1062 aa7.66□□□□□ -1.18
PTPN4-205ENST00000433888 CACNA2D2Q9NY47 1150 aa7.66□□□□□ -1.18
PTPN4-205ENST00000433888 GPN3Q9UHW5 284 aaPredicted RBP7.66□□□□□ -1.18
PTPN4-205ENST00000433888 DCTN4Q9UJW0 460 aa7.66□□□□□ -1.18
PTPN4-205ENST00000433888 U3KQE9 123 aa7.66□□□□□ -1.18
PTPN4-205ENST00000433888 FAM87AP0C7U9 286 aa7.65□□□□□ -1.18
PTPN4-205ENST00000433888 ARNTP27540 789 aa7.65□□□□□ -1.18
PTPN4-205ENST00000433888 PPP2R3AQ06190 1150 aa7.65□□□□□ -1.18
PTPN4-205ENST00000433888 ENOX2Q16206 610 aaKnown RBP7.65□□□□□ -1.18
PTPN4-205ENST00000433888 NXPE4Q6UWF7 544 aa7.65□□□□□ -1.18
PTPN4-205ENST00000433888 C3orf58Q8NDZ4 430 aa7.65□□□□□ -1.18
PTPN4-205ENST00000433888 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
PTPN4-205ENST00000433888 SUPT5HO00267 1087 aaKnown RBP7.64□□□□□ -1.19
PTPN4-205ENST00000433888 TREHO43280 583 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 NEFMP07197 916 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 ZNF252P-AS1Q0IIN9 211 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.64□□□□□ -1.19
PTPN4-205ENST00000433888 ZC3H12AQ5D1E8 599 aaKnown RBP7.64□□□□□ -1.19
PTPN4-205ENST00000433888 SULF2Q8IWU5 870 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 KCNB2Q92953 911 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 PIDD1Q9HB75 910 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 PCOLCE2Q9UKZ9 415 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 SLC5A6Q9Y289 635 aa7.64□□□□□ -1.19
PTPN4-205ENST00000433888 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
PTPN4-205ENST00000433888 LEFTY1O75610 366 aa7.63□□□□□ -1.19
PTPN4-205ENST00000433888 HCLS1P14317 486 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms