RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 C12orf50Q8NA57 414 aaPredicted RBP5.94□□□□□ -1.46
LINC01239-201ENST00000433645 UTP4Q969X6 686 aaKnown RBP5.94□□□□□ -1.46
LINC01239-201ENST00000433645 RNF19AQ9NV58 838 aa5.94□□□□□ -1.46
LINC01239-201ENST00000433645 TTF2Q9UNY4 1162 aaKnown RBP5.94□□□□□ -1.46
LINC01239-201ENST00000433645 K7ELQ4 463 aaPredicted RBP5.93□□□□□ -1.46
LINC01239-201ENST00000433645 GSC2O15499 205 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 CTSHP09668 335 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 ADH5P11766 374 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 ZNF16P17020 682 aaPredicted RBP5.93□□□□□ -1.46
LINC01239-201ENST00000433645 PREPP48147 710 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 TAGLNQ01995 201 aaKnown RBP5.93□□□□□ -1.46
LINC01239-201ENST00000433645 MRPL58Q14197 206 aaKnown RBP5.93□□□□□ -1.46
LINC01239-201ENST00000433645 CLEC10AQ8IUN9 316 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 FAM20CQ8IXL6 584 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 WDR18Q9BV38 432 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 CCDC86Q9H6F5 360 aaKnown RBP5.93□□□□□ -1.46
LINC01239-201ENST00000433645 RAD18Q9NS91 495 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 RAXQ9Y2V3 346 aa5.93□□□□□ -1.46
LINC01239-201ENST00000433645 CCDC9Q9Y3X0 531 aaKnown RBP5.93□□□□□ -1.46
LINC01239-201ENST00000433645 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.92□□□□□ -1.46
LINC01239-201ENST00000433645 ADAM23O75077 832 aa5.92□□□□□ -1.46
LINC01239-201ENST00000433645 ECEL1O95672 775 aa5.92□□□□□ -1.46
LINC01239-201ENST00000433645 FURINP09958 794 aa5.92□□□□□ -1.46
LINC01239-201ENST00000433645 PDE3AQ14432 1141 aa5.92□□□□□ -1.46
LINC01239-201ENST00000433645 CCDC85BQ15834 202 aaPredicted RBP5.92□□□□□ -1.46
LINC01239-201ENST00000433645 C2CD4AQ8NCU7 369 aaPredicted RBP5.92□□□□□ -1.46
LINC01239-201ENST00000433645 FAM83CQ9BQN1 747 aa5.92□□□□□ -1.46
LINC01239-201ENST00000433645 YIPF2Q9BWQ6 316 aa5.92□□□□□ -1.46
LINC01239-201ENST00000433645 GAS2O43903 313 aaKnown RBP5.91□□□□□ -1.46
LINC01239-201ENST00000433645 ZNF862O60290 1169 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 PAGE1O75459 146 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 CELA3AP09093 270 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 VAMP1P23763 118 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 PCNX4Q63HM2 1172 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 LLGL2Q6P1M3 1020 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 STK35Q8TDR2 534 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 EZH1Q92800 747 aaPredicted RBP5.91□□□□□ -1.46
LINC01239-201ENST00000433645 CRIM1Q9NZV1 1036 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 VTI1BQ9UEU0 232 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 PCDHGC5Q9Y5F6 944 aa5.91□□□□□ -1.46
LINC01239-201ENST00000433645 TMPRSS2O15393 492 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 FBXO24O75426 580 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 BMP3P12645 472 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 ID3Q02535 119 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 MEI1Q5TIA1 1274 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 TTBK2Q6IQ55 1244 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 AGMOQ6ZNB7 445 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 RGS22Q8NE09 1264 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 KCNB2Q92953 911 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 FAM161BQ96MY7 647 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 ATXN3LQ9H3M9 355 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 STOML1Q9UBI4 398 aa5.9□□□□□ -1.46
LINC01239-201ENST00000433645 DRD2P14416 443 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 LIG1P18858 919 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 USP11P51784 963 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 ERVK-24P63145 666 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 PWP1Q13610 501 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 ZC3H12AQ5D1E8 599 aaKnown RBP5.89□□□□□ -1.47
LINC01239-201ENST00000433645 AKAP4Q5JQC9 854 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 MAP1SQ66K74 1059 aaPredicted RBP5.89□□□□□ -1.47
LINC01239-201ENST00000433645 CCDC84Q86UT8 332 aaPredicted RBP5.89□□□□□ -1.47
LINC01239-201ENST00000433645 RSRP1Q9BUV0 290 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 SEMA6BQ9H3T3 888 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 ACSS3Q9H6R3 686 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 CBX8Q9HC52 389 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 ACTL7BQ9Y614 415 aa5.89□□□□□ -1.47
LINC01239-201ENST00000433645 MAP4P27816 1152 aaKnown RBP5.88□□□□□ -1.47
LINC01239-201ENST00000433645 LIG3P49916 1009 aa5.88□□□□□ -1.47
LINC01239-201ENST00000433645 RNF43Q68DV7 783 aa5.88□□□□□ -1.47
LINC01239-201ENST00000433645 BEND4Q6ZU67 534 aa5.88□□□□□ -1.47
LINC01239-201ENST00000433645 GPBAR1Q8TDU6 330 aa5.88□□□□□ -1.47
LINC01239-201ENST00000433645 WDR89Q96FK6 387 aaPredicted RBP5.88□□□□□ -1.47
LINC01239-201ENST00000433645 PPP1R9AQ9ULJ8 1098 aa5.88□□□□□ -1.47
LINC01239-201ENST00000433645 TACC3Q9Y6A5 838 aa5.88□□□□□ -1.47
LINC01239-201ENST00000433645 FSTP19883 344 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 ASPAP45381 313 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 RING1Q06587 406 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 MAP7Q14244 749 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 CPSF6Q16630 551 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC01239-201ENST00000433645 SGO2Q562F6 1265 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 PRSS36Q5K4E3 855 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 DIEXFQ68CQ4 756 aaKnown RBP5.87□□□□□ -1.47
LINC01239-201ENST00000433645 PAOXQ6QHF9 649 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 DYMQ7RTS9 669 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 GRIN3AQ8TCU5 1115 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 FANCD2OSQ96PS1 177 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 DBNDD2Q9BQY9 259 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 ZC3H12CQ9C0D7 883 aaKnown RBP5.87□□□□□ -1.47
LINC01239-201ENST00000433645 C7orf69Q9H7B7 122 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 AP4E1Q9UPM8 1137 aa5.87□□□□□ -1.47
LINC01239-201ENST00000433645 FAM95CA0A1B0GW59 222 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 IGLV1-40P01703 118 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 LMNB1P20700 586 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 NFIAQ12857 509 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 RASIP1Q5U651 963 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 CDPF1Q6NVV7 123 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 RNF214Q8ND24 703 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 GAL3ST3Q96A11 431 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 ACSBG1Q96GR2 724 aa5.86□□□□□ -1.47
LINC01239-201ENST00000433645 KCNF1Q9H3M0 494 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms