RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MKNK2Q9HBH9 465 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TCP11L1Q9NUJ3 509 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 RGPD8O14715 1765 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 PSDA5PKW4 1024 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 EIF3DO15371 548 aaKnown RBP eCLIP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 DKC1O60832 514 aaKnown RBP eCLIP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 PRPF6O94906 941 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 RBM6P78332 1123 aaKnown RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 EXOC8Q8IYI6 725 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 RASSF8Q8NHQ8 419 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 P3H4Q92791 437 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 ZSWIM6Q9HCJ5 1215 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 KDM3AQ9Y4C1 1321 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 CUTAO60888 179 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 HLA-DOAP06340 250 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 KRT83P78385 493 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 TTC12Q9H892 705 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 MAGEC2Q9UBF1 373 aaPredicted RBP4.3□□□□□ -1.72
SHPRH-205ENST00000433355 KIAA1551Q9HCM1 1747 aa4.3□□□□□ -1.72
SHPRH-205ENST00000433355 ARFGEF2Q9Y6D5 1785 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 MARF1Q9Y4F3 1742 aaKnown RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 HAUS3Q68CZ6 603 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 JAKMIP1Q96N16 626 aaKnown RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 MED4Q9NPJ6 270 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 KCND1Q9NSA2 647 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 GOLGA6L10A0A0M3HER8 536 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 CCDC194A0A1B0GVG4 234 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TRIM75PA6NK02 468 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 EXOC5O00471 708 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 MCM10Q7L590 875 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 NUP58Q9BVL2 599 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 FOXP1Q9H334 677 aaPredicted RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 PRR36Q9H6K5 1346 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 NEURL1BA8MQ27 555 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 C10orf76Q5T2E6 689 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 PPFIA3O75145 1194 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 ITIH3Q06033 890 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TNFAIP1Q13829 316 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 BMS1Q14692 1282 aaKnown RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 ADALQ6DHV7 355 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 NFXL1Q6ZNB6 911 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 MRGBPQ9NV56 204 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 SPTA1P02549 2419 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 RGPD3A6NKT7 1758 aaPredicted RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 RGPD4Q7Z3J3 1758 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 MYH2Q9UKX2 1941 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 GOLGA8BA8MQT2 603 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 IARSP41252 1262 aaKnown RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TPTE2Q6XPS3 522 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 KRT25Q7Z3Z0 450 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 RUNDC3BQ96NL0 473 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 PPCSQ9HAB8 311 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 CHPF2Q9P2E5 772 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 FEZ2Q9UHY8 353 aaPredicted RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 PSMA7O14818 248 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 COPB2P35606 906 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 ARHGAP29Q52LW3 1261 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 FKBP15Q5T1M5 1219 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 C20orf194Q5TEA3 1177 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 GIGYF2Q6Y7W6 1299 aaKnown RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 LMBR1Q8WVP7 490 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 CNTNAP4Q9C0A0 1308 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 ESYT2A0FGR8 921 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 SETQ01105 290 aaPredicted RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 BARGINQ6ZT62 677 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 FBXO18Q8NFZ0 1043 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TAF4BQ92750 862 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TRIM34Q9BYJ4 488 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 RTEL1Q9NZ71 1219 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 GOLGA6L10A6NI86 522 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 KIF5CO60282 957 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 RPLP2P05387 115 aaKnown RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 RLBP1P12271 317 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 PHKG2P15735 406 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 LTKP29376 864 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TTC39CQ8N584 583 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 MSL3Q8N5Y2 521 aaKnown RBP4.29□□□□□ -1.72
SHPRH-205ENST00000433355 MIS12Q9H081 205 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 DDIT3P35638 169 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TPRNQ4KMQ1 711 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 TNNI3KQ59H18 835 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 FPGT-TNNI3KV9GXZ4 949 aa4.29□□□□□ -1.72
SHPRH-205ENST00000433355 POTEJP0CG39 1038 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 RPS6KB1P23443 525 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 RPL13P26373 211 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 KRT28Q7Z3Y7 464 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 DGKHQ86XP1 1220 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 ARFGAP2Q8N6H7 521 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SUPT20HQ8NEM7 779 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SLAIN2Q9P270 581 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 SWAP70Q9UH65 585 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 PPME1Q9Y570 386 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 PAPPAQ13219 1627 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 GPATCH4Q5T3I0 446 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 TTC14Q96N46 770 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 DDX60Q8IY21 1712 aaKnown RBP4.28□□□□□ -1.72
SHPRH-205ENST00000433355 MUTP22033 750 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 XRRA1Q6P2D8 792 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 LUZP1Q86V48 1076 aa4.28□□□□□ -1.72
SHPRH-205ENST00000433355 CEP112Q8N8E3 955 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms