RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 FAM184AQ8NB25 1140 aa17.83■□□□□ 0.45
SF1-209ENST00000433274 PTPDC1A2A3K4 754 aa17.83■□□□□ 0.44
SF1-209ENST00000433274 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
SF1-209ENST00000433274 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
SF1-209ENST00000433274 PDIA4P13667 645 aaKnown RBP17.83■□□□□ 0.44
SF1-209ENST00000433274 EN1Q05925 392 aaPredicted RBP17.83■□□□□ 0.44
SF1-209ENST00000433274 EZH2Q15910 746 aaKnown RBP17.83■□□□□ 0.44
SF1-209ENST00000433274 MFSD6Q6ZSS7 791 aa17.83■□□□□ 0.44
SF1-209ENST00000433274 FERMT3Q86UX7 667 aa17.83■□□□□ 0.44
SF1-209ENST00000433274 DZIP1Q86YF9 867 aaKnown RBP17.83■□□□□ 0.44
SF1-209ENST00000433274 GPT2Q8TD30 523 aa17.83■□□□□ 0.44
SF1-209ENST00000433274 TOMM22Q9NS69 142 aa17.83■□□□□ 0.44
SF1-209ENST00000433274 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.444e-7■■■□□ 15.2
SF1-209ENST00000433274 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.44
SF1-209ENST00000433274 MINDY4BA8MYZ0 360 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 KDM4AO75164 1064 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 RRP12Q5JTH9 1297 aaKnown RBP17.82■□□□□ 0.44
SF1-209ENST00000433274 SPTY2D1Q68D10 685 aaPredicted RBP17.82■□□□□ 0.44
SF1-209ENST00000433274 WDR66Q8TBY9 1149 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 POLLQ9UGP5 575 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 ANGEL1Q9UNK9 670 aaKnown RBP17.82■□□□□ 0.44
SF1-209ENST00000433274 ANKRD31Q8N7Z5 1873 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 SRGNP10124 158 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 PPARAQ07869 468 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 USP48Q86UV5 1035 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 TBC1D16Q8TBP0 767 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 CNNM2Q9H8M5 875 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 ANO8Q9HCE9 1232 aaPredicted RBP17.82■□□□□ 0.44
SF1-209ENST00000433274 PODXL2Q9NZ53 605 aa17.82■□□□□ 0.44
SF1-209ENST00000433274 C6orf229H3BNL8 230 aa17.81■□□□□ 0.44
SF1-209ENST00000433274 SH2B2O14492 632 aaPredicted RBP17.81■□□□□ 0.44
SF1-209ENST00000433274 ZBTB22O15209 634 aa17.81■□□□□ 0.44
SF1-209ENST00000433274 CAVIN1Q6NZI2 390 aaKnown RBP17.81■□□□□ 0.44
SF1-209ENST00000433274 KRT23Q9C075 422 aa17.81■□□□□ 0.44
SF1-209ENST00000433274 CD209Q9NNX6 404 aa17.81■□□□□ 0.44
SF1-209ENST00000433274 ZSWIM5Q9P217 1185 aa17.81■□□□□ 0.44
SF1-209ENST00000433274 HPS5Q9UPZ3 1129 aa17.81■□□□□ 0.44
SF1-209ENST00000433274 LDHBP07195 334 aaKnown RBP17.81■□□□□ 0.44
SF1-209ENST00000433274 HMGN5P82970 282 aaKnown RBP17.81■□□□□ 0.44
SF1-209ENST00000433274 DNM1Q05193 864 aaKnown RBP17.81■□□□□ 0.44
SF1-209ENST00000433274 SALL1Q9NSC2 1324 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 NPR1P16066 1061 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 PDE6BP35913 854 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 CHMP4CQ96CF2 233 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 TMEM87BQ96K49 555 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 TIAM2Q8IVF5 1701 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 NRXN2Q9P2S2 1712 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 H3BQV1 296 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 SMIM22K7EJ46 135 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 FIBPO43427 364 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 FOSBP53539 338 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 GRIK5Q16478 980 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 TMEM67Q5HYA8 995 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 IFFO2Q5TF58 517 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 CAMKK2Q96RR4 588 aa17.8■□□□□ 0.44
SF1-209ENST00000433274 CYP2D7A0A087X1C5 515 aa17.79■□□□□ 0.44
SF1-209ENST00000433274 IGDCC4Q8TDY8 1250 aa17.79■□□□□ 0.44
SF1-209ENST00000433274 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
SF1-209ENST00000433274 RNF41Q9H4P4 317 aaPredicted RBP17.79■□□□□ 0.44
SF1-209ENST00000433274 ATP6V0A2Q9Y487 856 aa17.79■□□□□ 0.44
SF1-209ENST00000433274 IFIT3O14879 490 aaKnown RBP17.78■□□□□ 0.44
SF1-209ENST00000433274 GADD45BO75293 160 aaPredicted RBP17.78■□□□□ 0.44
SF1-209ENST00000433274 SLC15A2Q16348 729 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 FAM173BQ6P4H8 233 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 OLFM4Q6UX06 510 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 NFXL1Q6ZNB6 911 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 TCHHQ07283 1943 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 CHD4Q14839 1912 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 GOLGA6L3A6NEY3 463 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 DHX16O60231 1041 aaKnown RBP17.78■□□□□ 0.44
SF1-209ENST00000433274 ZKSCAN3Q9BRR0 538 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 LY9Q9HBG7 655 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 RBM27Q9P2N5 1060 aaKnown RBP17.78■□□□□ 0.44
SF1-209ENST00000433274 ANAPC4Q9UJX5 808 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 RGPD3A6NKT7 1758 aaPredicted RBP17.78■□□□□ 0.44
SF1-209ENST00000433274 RGPD4Q7Z3J3 1758 aa17.78■□□□□ 0.44
SF1-209ENST00000433274 CPLX1O14810 134 aa17.77■□□□□ 0.44
SF1-209ENST00000433274 MBD3O95983 291 aa17.77■□□□□ 0.44
SF1-209ENST00000433274 IL1R1P14778 569 aa17.77■□□□□ 0.44
SF1-209ENST00000433274 RXRAP19793 462 aa17.77■□□□□ 0.44
SF1-209ENST00000433274 DIXDC1Q155Q3 683 aa17.77■□□□□ 0.44
SF1-209ENST00000433274 TMEM87AQ8NBN3 555 aa17.77■□□□□ 0.44
SF1-209ENST00000433274 MAST2Q6P0Q8 1798 aa17.77■□□□□ 0.44
SF1-209ENST00000433274 ALDH1B1P30837 517 aa17.77■□□□□ 0.43
SF1-209ENST00000433274 TPRNQ4KMQ1 711 aa17.77■□□□□ 0.43
SF1-209ENST00000433274 CTR9Q6PD62 1173 aa17.77■□□□□ 0.43
SF1-209ENST00000433274 TMED8Q6PL24 325 aaPredicted RBP17.77■□□□□ 0.43
SF1-209ENST00000433274 APOA5Q6Q788 366 aa17.77■□□□□ 0.43
SF1-209ENST00000433274 STK32BQ9NY57 414 aa17.77■□□□□ 0.43
SF1-209ENST00000433274 CCDC88AQ3V6T2 1871 aa17.77■□□□□ 0.43
SF1-209ENST00000433274 USP17L12C9JPN9 530 aa17.76■□□□□ 0.43
SF1-209ENST00000433274 USP17L21D6R901 530 aa17.76■□□□□ 0.43
SF1-209ENST00000433274 RIMBP2O15034 1052 aa17.76■□□□□ 0.43
SF1-209ENST00000433274 METAP2P50579 478 aaKnown RBP eCLIP17.76■□□□□ 0.431e-7■□□□□ 10.8
SF1-209ENST00000433274 GIMAP6Q6P9H5 292 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms