RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 RTEL1Q9NZ71 1219 aa12.24□□□□□ -0.45
SMPD4-206ENST00000433118 CTNNA3Q9UI47 895 aa12.24□□□□□ -0.45
SMPD4-206ENST00000433118 NUP98P52948 1817 aa12.24□□□□□ -0.45
SMPD4-206ENST00000433118 KLF18A0A0U1RQI7 1052 aa12.24□□□□□ -0.45
SMPD4-206ENST00000433118 CPLX1O14810 134 aa12.24□□□□□ -0.45
SMPD4-206ENST00000433118 LRRFIP1Q32MZ4 808 aaKnown RBP12.24□□□□□ -0.45
SMPD4-206ENST00000433118 AEBP2Q6ZN18 517 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-206ENST00000433118 CCNL1Q9UK58 526 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-206ENST00000433118 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
SMPD4-206ENST00000433118 CLIC4Q9Y696 253 aa12.24□□□□□ -0.45
SMPD4-206ENST00000433118 GOLGA8BA8MQT2 603 aa12.23□□□□□ -0.45
SMPD4-206ENST00000433118 NPHP1O15259 732 aa12.23□□□□□ -0.45
SMPD4-206ENST00000433118 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
SMPD4-206ENST00000433118 PUS7LQ9H0K6 701 aaKnown RBP12.23□□□□□ -0.45
SMPD4-206ENST00000433118 RIC1Q4ADV7 1423 aa12.23□□□□□ -0.45
SMPD4-206ENST00000433118 PRC1O43663 620 aa12.23□□□□□ -0.45
SMPD4-206ENST00000433118 DHX16O60231 1041 aaKnown RBP12.23□□□□□ -0.45
SMPD4-206ENST00000433118 DMTNQ08495 405 aa12.23□□□□□ -0.45
SMPD4-206ENST00000433118 LINC00301Q8NCQ3 95 aa12.23□□□□□ -0.45
SMPD4-206ENST00000433118 AFF2P51816 1311 aa12.23□□□□□ -0.45
SMPD4-206ENST00000433118 NTSR2O95665 410 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 SYCP1Q15431 976 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 DPCR1Q3MIW9 517 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 SYNE3Q6ZMZ3 975 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
SMPD4-206ENST00000433118 TICAM2Q86XR7 235 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 KCNG4Q8TDN1 519 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-206ENST00000433118 ZHX1Q9UKY1 873 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-206ENST00000433118 BIN1O00499 593 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 SMC2O95347 1197 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 CCZ1BP86790 482 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 CCZ1P86791 482 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-206ENST00000433118 A0A1W2PQ27 194 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 A0A1W2PQ64 194 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 A0A1W2PQD8 194 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 SPTLC2O15270 562 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 FGAP02671 866 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 VGLL2Q8N8G2 317 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-206ENST00000433118 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
SMPD4-206ENST00000433118 BCAMP50895 628 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 SLC9C2Q5TAH2 1124 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 FBXO18Q8NFZ0 1043 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 CGNQ9P2M7 1197 aaKnown RBP12.21□□□□□ -0.45
SMPD4-206ENST00000433118 GSDMDP57764 484 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 CCDC152Q4G0S7 254 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 MYSM1Q5VVJ2 828 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 STK11IPQ8N1F8 1099 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 NCOA7Q8NI08 942 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 FEZ1Q99689 392 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.45
SMPD4-206ENST00000433118 POLR3EQ9NVU0 708 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 ZNF652Q9Y2D9 606 aa12.21□□□□□ -0.45
SMPD4-206ENST00000433118 APPP05067 770 aa12.21□□□□□ -0.46
SMPD4-206ENST00000433118 IGHMBP2P38935 993 aaKnown RBP12.21□□□□□ -0.46
SMPD4-206ENST00000433118 EVCP57679 992 aa12.21□□□□□ -0.46
SMPD4-206ENST00000433118 NYAP1Q6ZVC0 841 aa12.21□□□□□ -0.46
SMPD4-206ENST00000433118 SLC51AQ86UW1 340 aa12.21□□□□□ -0.46
SMPD4-206ENST00000433118 SEPT12Q8IYM1 358 aa12.21□□□□□ -0.46
SMPD4-206ENST00000433118 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.46
SMPD4-206ENST00000433118 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.46
SMPD4-206ENST00000433118 SPEF2Q9C093 1822 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 ZNF213O14771 459 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 YEATS4O95619 227 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 ZFYP08048 801 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 IFNKQ9P0W0 207 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 V9GYY5 206 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 FOXP2O15409 715 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 TPM4P67936 248 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 PUM3Q15397 648 aaKnown RBP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 TMC6Q7Z403 805 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 FBXL16Q8N461 479 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 XPO4Q9C0E2 1151 aaKnown RBP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 ZNF215Q9UL58 517 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-206ENST00000433118 WWC3Q9ULE0 1092 aa12.2□□□□□ -0.46
SMPD4-206ENST00000433118 ZPR1O75312 459 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 ZNF202O95125 648 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 NBPF11Q86T75 865 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 KIF18AQ8NI77 898 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 CHRNDQ07001 517 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 ISM2Q6H9L7 571 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-206ENST00000433118 APPBP2Q92624 585 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 NWD2Q9ULI1 1742 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 KIF28PB7ZC32 967 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 GPAA1O43292 621 aa12.19□□□□□ -0.46
SMPD4-206ENST00000433118 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms