RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 ZNF804BA4D1E1 1349 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 LUZP1Q86V48 1076 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 ERCC4Q92889 916 aaPredicted RBP17.15■□□□□ 0.34
RFTN1-203ENST00000432519 USP21Q9UK80 565 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 CLIC4Q9Y696 253 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 BTAF1O14981 1849 aa17.15■□□□□ 0.34
RFTN1-203ENST00000432519 SNW1Q13573 536 aaKnown RBP17.14■□□□□ 0.34
RFTN1-203ENST00000432519 UVSSAQ2YD98 709 aa17.14■□□□□ 0.34
RFTN1-203ENST00000432519 HS1BP3Q53T59 392 aa17.14■□□□□ 0.34
RFTN1-203ENST00000432519 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.34
RFTN1-203ENST00000432519 FAM84BQ96KN1 310 aaPredicted RBP17.14■□□□□ 0.34
RFTN1-203ENST00000432519 BSDC1Q9NW68 430 aaPredicted RBP17.14■□□□□ 0.34
RFTN1-203ENST00000432519 KIF3AQ9Y496 699 aa17.14■□□□□ 0.34
RFTN1-203ENST00000432519 WDR19Q8NEZ3 1342 aa17.14■□□□□ 0.34
RFTN1-203ENST00000432519 RANBP6O60518 1105 aaKnown RBP17.14■□□□□ 0.33
RFTN1-203ENST00000432519 CYP7A1P22680 504 aa17.14■□□□□ 0.33
RFTN1-203ENST00000432519 MSNP26038 577 aaKnown RBP17.14■□□□□ 0.33
RFTN1-203ENST00000432519 METAP2P50579 478 aaKnown RBP eCLIP17.14■□□□□ 0.33
RFTN1-203ENST00000432519 EVX2Q03828 476 aa17.14■□□□□ 0.33
RFTN1-203ENST00000432519 RBM43Q6ZSC3 357 aaKnown RBP17.14■□□□□ 0.33
RFTN1-203ENST00000432519 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
RFTN1-203ENST00000432519 ZKSCAN5Q9Y2L8 839 aa17.14■□□□□ 0.33
RFTN1-203ENST00000432519 TDO2P48775 406 aa17.14■□□□□ 0.33
RFTN1-203ENST00000432519 ANO6Q4KMQ2 910 aa17.14■□□□□ 0.33
RFTN1-203ENST00000432519 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
RFTN1-203ENST00000432519 NARFQ9UHQ1 456 aa17.14■□□□□ 0.33
RFTN1-203ENST00000432519 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 NTRK3Q16288 839 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 TMEM67Q5HYA8 995 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 CHD4Q14839 1912 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 CYP2D7A0A087X1C5 515 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
RFTN1-203ENST00000432519 AKNAD1Q5T1N1 836 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
RFTN1-203ENST00000432519 TOMM22Q9NS69 142 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 RAI14Q9P0K7 980 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
RFTN1-203ENST00000432519 PCDHA7Q9UN72 937 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
RFTN1-203ENST00000432519 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
RFTN1-203ENST00000432519 ME1P48163 572 aa17.12■□□□□ 0.33
RFTN1-203ENST00000432519 TXNRD3Q86VQ6 643 aa17.12■□□□□ 0.33
RFTN1-203ENST00000432519 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
RFTN1-203ENST00000432519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
RFTN1-203ENST00000432519 PNPLA7Q6ZV29 1317 aa17.12■□□□□ 0.33
RFTN1-203ENST00000432519 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
RFTN1-203ENST00000432519 NFXL1Q6ZNB6 911 aa17.12■□□□□ 0.33
RFTN1-203ENST00000432519 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
RFTN1-203ENST00000432519 SETDB2Q96T68 719 aa17.12■□□□□ 0.33
RFTN1-203ENST00000432519 SCN7AQ01118 1682 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
RFTN1-203ENST00000432519 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
RFTN1-203ENST00000432519 SLC10A5Q5PT55 438 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 ENGASEQ8NFI3 743 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 ZNF831Q5JPB2 1677 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 ZBTB43O43298 467 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 MFSD6Q6ZSS7 791 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 LINC00301Q8NCQ3 95 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
RFTN1-203ENST00000432519 ALG1Q9BT22 464 aa17.11■□□□□ 0.33
RFTN1-203ENST00000432519 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
RFTN1-203ENST00000432519 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 GUCY1A2P33402 732 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 RPS8P62241 208 aaKnown RBP17.1■□□□□ 0.33
RFTN1-203ENST00000432519 MYSM1Q5VVJ2 828 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 SGMS1Q86VZ5 419 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 CCDC82Q8N4S0 544 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 FAM200AQ8TCP9 573 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 ZNF396Q96N95 335 aaPredicted RBP17.1■□□□□ 0.33
RFTN1-203ENST00000432519 BAZ2AQ9UIF9 1905 aaKnown RBP17.1■□□□□ 0.33
RFTN1-203ENST00000432519 A0A1B0GVL5 298 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 FSIP1Q8NA03 581 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 NAP1L5Q96NT1 182 aaPredicted RBP17.1■□□□□ 0.33
RFTN1-203ENST00000432519 RTEL1Q9NZ71 1219 aa17.1■□□□□ 0.33
RFTN1-203ENST00000432519 GOLGA8AA7E2F4 631 aa17.09■□□□□ 0.33
RFTN1-203ENST00000432519 ZPR1O75312 459 aa17.09■□□□□ 0.33
RFTN1-203ENST00000432519 TM4SF1P30408 202 aa17.09■□□□□ 0.33
RFTN1-203ENST00000432519 VPS37DQ86XT2 251 aa17.09■□□□□ 0.33
RFTN1-203ENST00000432519 ECM29Q5VYK3 1845 aa17.09■□□□□ 0.33
RFTN1-203ENST00000432519 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
RFTN1-203ENST00000432519 KRT40Q6A162 431 aa17.09■□□□□ 0.33
RFTN1-203ENST00000432519 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
RFTN1-203ENST00000432519 PPARAQ07869 468 aa17.08■□□□□ 0.33
RFTN1-203ENST00000432519 NLRP3Q96P20 1036 aa17.08■□□□□ 0.33
RFTN1-203ENST00000432519 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.33
RFTN1-203ENST00000432519 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.32
RFTN1-203ENST00000432519 MAGEB6P1A0A0J9YX57 407 aa17.08■□□□□ 0.32
RFTN1-203ENST00000432519 LIFRP42702 1097 aa17.08■□□□□ 0.32
RFTN1-203ENST00000432519 NDUFA8P51970 172 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms