RNA–Protein interactions for RNA: ENST00000431051.5

PSMD1-204, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 1 (best)

Gene PSMD1, Length 2,506 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-204ENST00000431051 NAPBQ9H115 298 aa17.53■□□□□ 0.4
PSMD1-204ENST00000431051 ATP6V1AP38606 617 aa17.52■□□□□ 0.4
PSMD1-204ENST00000431051 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
PSMD1-204ENST00000431051 DPCR1Q3MIW9 517 aa17.52■□□□□ 0.4
PSMD1-204ENST00000431051 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
PSMD1-204ENST00000431051 VPS37DQ86XT2 251 aa17.52■□□□□ 0.4
PSMD1-204ENST00000431051 IFNL3Q8IZI9 196 aa17.52■□□□□ 0.4
PSMD1-204ENST00000431051 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
PSMD1-204ENST00000431051 ZBTB43O43298 467 aa17.52■□□□□ 0.39
PSMD1-204ENST00000431051 MAP3K12Q12852 859 aa17.52■□□□□ 0.39
PSMD1-204ENST00000431051 GNL2Q13823 731 aaKnown RBP17.52■□□□□ 0.39
PSMD1-204ENST00000431051 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.39
PSMD1-204ENST00000431051 KRT40Q6A162 431 aa17.52■□□□□ 0.39
PSMD1-204ENST00000431051 IGDCC4Q8TDY8 1250 aa17.52■□□□□ 0.39
PSMD1-204ENST00000431051 C16orf45Q96MC5 204 aaPredicted RBP17.52■□□□□ 0.39
PSMD1-204ENST00000431051 TOMM22Q9NS69 142 aa17.52■□□□□ 0.39
PSMD1-204ENST00000431051 TACC3Q9Y6A5 838 aa17.52■□□□□ 0.39
PSMD1-204ENST00000431051 ANKRD36CQ5JPF3 1778 aa17.52■□□□□ 0.39
PSMD1-204ENST00000431051 KDM4FA0A1W2PPD8 638 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 WDHD1O75717 1129 aaPredicted RBP17.51■□□□□ 0.39
PSMD1-204ENST00000431051 ADAMTS2O95450 1211 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
PSMD1-204ENST00000431051 FILIP1Q7Z7B0 1213 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 ZKSCAN3Q9BRR0 538 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 ZSWIM5Q9P217 1185 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 MROH7-TTC4A0A0A0MT08 1334 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
PSMD1-204ENST00000431051 ZNF202O95125 648 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 ZRSR1Q15695 479 aaKnown RBP17.51■□□□□ 0.39
PSMD1-204ENST00000431051 ISM2Q6H9L7 571 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 SARM1Q6SZW1 724 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 MIGA1Q8NAN2 632 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 UTP14AQ9BVJ6 771 aaKnown RBP17.51■□□□□ 0.39
PSMD1-204ENST00000431051 KIAA1468Q9P260 1216 aa17.51■□□□□ 0.39
PSMD1-204ENST00000431051 GOLGA8AA7E2F4 631 aa17.5■□□□□ 0.39
PSMD1-204ENST00000431051 IFIT3O14879 490 aaKnown RBP17.5■□□□□ 0.39
PSMD1-204ENST00000431051 RANBP6O60518 1105 aaKnown RBP17.5■□□□□ 0.39
PSMD1-204ENST00000431051 PFKFB1P16118 471 aa17.5■□□□□ 0.39
PSMD1-204ENST00000431051 AXDND1Q5T1B0 1012 aaPredicted RBP17.5■□□□□ 0.39
PSMD1-204ENST00000431051 CCDC87Q9NVE4 849 aa17.5■□□□□ 0.39
PSMD1-204ENST00000431051 CHAF1AQ13111 956 aaPredicted RBP17.5■□□□□ 0.39
PSMD1-204ENST00000431051 LCORLQ8N3X6 602 aa17.5■□□□□ 0.39
PSMD1-204ENST00000431051 RIOK3O14730 519 aaKnown RBP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 CDKL5O76039 1030 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 IARSP41252 1262 aaKnown RBP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 CCDC82Q8N4S0 544 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 TMEM87BQ96K49 555 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 FAM217BQ9NTX9 383 aaPredicted RBP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 NIP7Q9Y221 180 aaKnown RBP eCLIP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 GSG1L2A8MUP6 293 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 SLC3A2P08195 630 aaKnown RBP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 CDC25BP30305 580 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 TDO2P48775 406 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 NTRK3Q16288 839 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 MRFAP1L1Q96HT8 127 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 SLC26A6Q9BXS9 759 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 SLC12A7Q9Y666 1083 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 C4AP0C0L4 1744 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 C4BP0C0L5 1744 aa17.49■□□□□ 0.39
PSMD1-204ENST00000431051 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
PSMD1-204ENST00000431051 LRRC8AQ8IWT6 810 aa17.48■□□□□ 0.39
PSMD1-204ENST00000431051 SLC4A4Q9Y6R1 1079 aa17.48■□□□□ 0.39
PSMD1-204ENST00000431051 WTIPA6NIX2 430 aaPredicted RBP17.48■□□□□ 0.39
PSMD1-204ENST00000431051 ITPK1Q13572 414 aa17.48■□□□□ 0.39
PSMD1-204ENST00000431051 SLC39A14Q15043 492 aa17.48■□□□□ 0.39
PSMD1-204ENST00000431051 DDB1Q16531 1140 aa17.48■□□□□ 0.39
PSMD1-204ENST00000431051 CMTR1Q8N1G2 835 aaKnown RBP17.48■□□□□ 0.39
PSMD1-204ENST00000431051 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 CAMTA2O94983 1202 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 IGHMBP2P38935 993 aaKnown RBP17.47■□□□□ 0.39
PSMD1-204ENST00000431051 SIK1P57059 783 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 CCDC152Q4G0S7 254 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 MFSD6Q6ZSS7 791 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 ZNF710Q8N1W2 664 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 CLIC6Q96NY7 704 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 LRP2BPQ9P2M1 347 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 CMA1P23946 247 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 TRIM29Q14134 588 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 ALX1Q15699 326 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 AKNAD1Q5T1N1 836 aa17.47■□□□□ 0.39
PSMD1-204ENST00000431051 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
PSMD1-204ENST00000431051 GUCY1A2P33402 732 aa17.46■□□□□ 0.39
PSMD1-204ENST00000431051 GTF2F1P35269 517 aaKnown RBP eCLIP17.46■□□□□ 0.39
PSMD1-204ENST00000431051 SGMS1Q86VZ5 419 aa17.46■□□□□ 0.39
PSMD1-204ENST00000431051 CHRNDQ07001 517 aa17.46■□□□□ 0.38
PSMD1-204ENST00000431051 TPD52L1Q16890 204 aaPredicted RBP17.46■□□□□ 0.38
PSMD1-204ENST00000431051 AK7Q96M32 723 aa17.46■□□□□ 0.38
PSMD1-204ENST00000431051 ABCF2Q9UG63 623 aa17.46■□□□□ 0.38
PSMD1-204ENST00000431051 DOT1LQ8TEK3 1739 aa17.46■□□□□ 0.38
PSMD1-204ENST00000431051 COL14A1Q05707 1796 aaKnown RBP17.45■□□□□ 0.38
PSMD1-204ENST00000431051 SYKP43405 635 aa17.45■□□□□ 0.38
PSMD1-204ENST00000431051 GLIPR1L2Q4G1C9 344 aa17.45■□□□□ 0.38
PSMD1-204ENST00000431051 SHC4Q6S5L8 630 aa17.45■□□□□ 0.38
PSMD1-204ENST00000431051 USP27XA6NNY8 438 aa17.45■□□□□ 0.38
PSMD1-204ENST00000431051 SMIM22K7EJ46 135 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms