RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 TFCP2Q12800 502 aa20.23■□□□□ 0.83
PTPRA-206ENST00000430705 RASGRF1Q13972 1273 aa20.23■□□□□ 0.83
PTPRA-206ENST00000430705 ATRNL1Q5VV63 1379 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 PNMA6EA0A0J9YXQ4 647 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 SPDYE5A6NIY4 337 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 SEMA3EO15041 775 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 TIMM10P62072 90 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 PKN2Q16513 984 aaKnown RBP20.22■□□□□ 0.83
PTPRA-206ENST00000430705 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
PTPRA-206ENST00000430705 ZKSCAN4Q969J2 545 aaPredicted RBP20.22■□□□□ 0.83
PTPRA-206ENST00000430705 CLUAP1Q96AJ1 413 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 TMOD2Q9NZR1 351 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 FAM198AQ9UFP1 575 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 DENND2AQ9ULE3 1009 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 HDAC5Q9UQL6 1122 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 ZSWIM8A7E2V4 1837 aa20.22■□□□□ 0.83
PTPRA-206ENST00000430705 A0A1B0GUL7 405 aa20.21■□□□□ 0.83
PTPRA-206ENST00000430705 LDHBP07195 334 aaKnown RBP20.21■□□□□ 0.83
PTPRA-206ENST00000430705 FBXO46Q6PJ61 603 aaPredicted RBP20.21■□□□□ 0.83
PTPRA-206ENST00000430705 TMEM57Q8N5G2 664 aa20.21■□□□□ 0.83
PTPRA-206ENST00000430705 OTUD5Q96G74 571 aa20.21■□□□□ 0.83
PTPRA-206ENST00000430705 WRNIP1Q96S55 665 aa20.21■□□□□ 0.83
PTPRA-206ENST00000430705 GNL3LQ9NVN8 582 aaKnown RBP20.21■□□□□ 0.83
PTPRA-206ENST00000430705 GAKO14976 1311 aa20.21■□□□□ 0.83
PTPRA-206ENST00000430705 PDS5AQ29RF7 1337 aaKnown RBP20.21■□□□□ 0.83
PTPRA-206ENST00000430705 ZFPM1Q8IX07 1006 aa20.2■□□□□ 0.82
PTPRA-206ENST00000430705 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.82
PTPRA-206ENST00000430705 ZNF384Q8TF68 577 aa20.2■□□□□ 0.82
PTPRA-206ENST00000430705 FAM151AQ8WW52 585 aa20.2■□□□□ 0.82
PTPRA-206ENST00000430705 XAGE2Q96GT9 111 aa20.2■□□□□ 0.82
PTPRA-206ENST00000430705 CSADQ9Y600 493 aa20.2■□□□□ 0.82
PTPRA-206ENST00000430705 CCL15-CCL14A0A0B4J2E2 113 aa20.19■□□□□ 0.82
PTPRA-206ENST00000430705 TCP10Q12799 353 aa20.19■□□□□ 0.82
PTPRA-206ENST00000430705 CCL15Q16663 113 aa20.19■□□□□ 0.82
PTPRA-206ENST00000430705 MIGA2Q7L4E1 593 aa20.19■□□□□ 0.82
PTPRA-206ENST00000430705 OTOP1Q7RTM1 612 aa20.19■□□□□ 0.82
PTPRA-206ENST00000430705 IPO8O15397 1037 aaKnown RBP20.18■□□□□ 0.82
PTPRA-206ENST00000430705 GNAI2P04899 355 aa20.18■□□□□ 0.82
PTPRA-206ENST00000430705 INPP5BP32019 993 aa20.18■□□□□ 0.82
PTPRA-206ENST00000430705 HNRNPUQ00839 825 aaKnown RBP eCLIP20.18■□□□□ 0.82
PTPRA-206ENST00000430705 PI16Q6UXB8 463 aa20.18■□□□□ 0.82
PTPRA-206ENST00000430705 CD99L2Q8TCZ2 262 aa20.18■□□□□ 0.82
PTPRA-206ENST00000430705 MKI67P46013 3256 aaKnown RBP20.17■□□□□ 0.82
PTPRA-206ENST00000430705 GTF2A2P52657 109 aa20.17■□□□□ 0.82
PTPRA-206ENST00000430705 USP40Q9NVE5 1235 aa20.17■□□□□ 0.82
PTPRA-206ENST00000430705 ZNF112Q9UJU3 913 aa20.17■□□□□ 0.82
PTPRA-206ENST00000430705 TRIM17Q9Y577 477 aa20.17■□□□□ 0.82
PTPRA-206ENST00000430705 MAST2Q6P0Q8 1798 aa20.16■□□□□ 0.82
PTPRA-206ENST00000430705 IRF6O14896 467 aa20.16■□□□□ 0.82
PTPRA-206ENST00000430705 PPIL2Q13356 520 aa20.16■□□□□ 0.82
PTPRA-206ENST00000430705 SH3BP5LQ7L8J4 393 aa20.16■□□□□ 0.82
PTPRA-206ENST00000430705 ERO1BQ86YB8 467 aa20.16■□□□□ 0.82
PTPRA-206ENST00000430705 ZNF341Q9BYN7 854 aa20.16■□□□□ 0.82
PTPRA-206ENST00000430705 RBBP6Q7Z6E9 1792 aaKnown RBP20.16■□□□□ 0.82
PTPRA-206ENST00000430705 SLURP2P0DP57 97 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 RLBP1P12271 317 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 POLA2Q14181 598 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 ZKSCAN2Q63HK3 967 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 DCAF15Q66K64 600 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 OTUD7BQ6GQQ9 843 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 DDX4Q9NQI0 724 aaKnown RBP20.15■□□□□ 0.82
PTPRA-206ENST00000430705 HMG20BQ9P0W2 317 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 AKAP2Q9Y2D5 859 aa20.15■□□□□ 0.82
PTPRA-206ENST00000430705 AK9Q5TCS8 1911 aa20.14■□□□□ 0.81
PTPRA-206ENST00000430705 WDHD1O75717 1129 aaPredicted RBP20.14■□□□□ 0.81
PTPRA-206ENST00000430705 RGS3P49796 1198 aa20.14■□□□□ 0.81
PTPRA-206ENST00000430705 MVPQ14764 893 aaKnown RBP20.14■□□□□ 0.81
PTPRA-206ENST00000430705 TAF1CQ15572 869 aaPredicted RBP20.14■□□□□ 0.81
PTPRA-206ENST00000430705 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
PTPRA-206ENST00000430705 HOOK2Q96ED9 719 aa20.14■□□□□ 0.81
PTPRA-206ENST00000430705 IDI2Q9BXS1 227 aa20.14■□□□□ 0.81
PTPRA-206ENST00000430705 ABCF2Q9UG63 623 aa20.14■□□□□ 0.81
PTPRA-206ENST00000430705 PHIPQ8WWQ0 1821 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 MROH7-TTC4A0A0A0MT08 1334 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 BTBD19C9JJ37 291 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 ARID4AP29374 1257 aaPredicted RBP20.13■□□□□ 0.81
PTPRA-206ENST00000430705 SP3Q02447 781 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 MOGSQ13724 837 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 ZGPATQ8N5A5 531 aaKnown RBP20.13■□□□□ 0.81
PTPRA-206ENST00000430705 FAM163AQ96GL9 167 aaPredicted RBP20.13■□□□□ 0.81
PTPRA-206ENST00000430705 ERO1AQ96HE7 468 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 C1orf115Q9H7X2 142 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 DOCK1Q14185 1865 aa20.13■□□□□ 0.81
PTPRA-206ENST00000430705 CETPP11597 493 aa20.12■□□□□ 0.81
PTPRA-206ENST00000430705 MCAMP43121 646 aa20.12■□□□□ 0.81
PTPRA-206ENST00000430705 BTDP43251 543 aa20.12■□□□□ 0.81
PTPRA-206ENST00000430705 RHBDL3P58872 404 aa20.12■□□□□ 0.81
PTPRA-206ENST00000430705 MECOMQ03112 1051 aa20.12■□□□□ 0.81
PTPRA-206ENST00000430705 NOL9Q5SY16 702 aaKnown RBP20.12■□□□□ 0.81
PTPRA-206ENST00000430705 DZIP1Q86YF9 867 aaKnown RBP20.12■□□□□ 0.81
PTPRA-206ENST00000430705 NEUROD6Q96NK8 337 aa20.12■□□□□ 0.81
PTPRA-206ENST00000430705 PTPN22Q9Y2R2 807 aa20.12■□□□□ 0.81
PTPRA-206ENST00000430705 SIPA1L1O43166 1804 aa20.11■□□□□ 0.81
PTPRA-206ENST00000430705 PHF20L1A8MW92 1017 aa20.11■□□□□ 0.81
PTPRA-206ENST00000430705 ENTPD3O75355 529 aa20.11■□□□□ 0.81
PTPRA-206ENST00000430705 PPATQ06203 517 aa20.11■□□□□ 0.81
PTPRA-206ENST00000430705 SNAPC2Q13487 334 aa20.11■□□□□ 0.81
PTPRA-206ENST00000430705 TBC1D9Q6ZT07 1266 aa20.11■□□□□ 0.81
PTPRA-206ENST00000430705 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
PTPRA-206ENST00000430705 SSH3Q8TE77 659 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms