RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 GRM8O00222 908 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 SPECC1LQ69YQ0 1117 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 MMS22LQ6ZRQ5 1243 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 KAT2BQ92831 832 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 RABEP2Q9H5N1 569 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 E7EWF7 191 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 RNF40O75150 1001 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 PPFIA4O75335 1185 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 ABL1P00519 1130 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 CCDC175P0C221 793 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 LIG3P49916 1009 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 MCTP2Q6DN12 878 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 EFCAB13Q8IY85 973 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 CEP112Q8N8E3 955 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 NOA1Q8NC60 698 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 RIN2Q8WYP3 895 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 C19orf44Q9H6X5 657 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 PCDHA5Q9Y5H7 936 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 A2ML1A8K2U0 1454 aa12.68□□□□□ -0.38
SEMA4D-209ENST00000429836 HMGB1P09429 215 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 FMR1Q06787 632 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 ZNF827Q17R98 1081 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 SHC4Q6S5L8 630 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 GDAP1L1Q96MZ0 367 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 NALCNQ8IZF0 1738 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 APPP05067 770 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 LONRF3Q496Y0 759 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 CDC5LQ99459 802 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 KIF5CO60282 957 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 TFCP2Q12800 502 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 SUGP1Q8IWZ8 645 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 SLC35F6Q8N357 371 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 DBNDD2Q9BQY9 259 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 TEX13AQ9BXU3 409 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 NFE2L3Q9Y4A8 694 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
SEMA4D-209ENST00000429836 NCAPD2Q15021 1401 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 CPP00450 1065 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 ATP5JP18859 108 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 ZNF274Q96GC6 653 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 AIFM3Q96NN9 605 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 FBXW10Q5XX13 1052 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 CXorf56Q9H5V9 222 aa12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 SAMSN1Q9NSI8 373 aaKnown RBP12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-209ENST00000429836 ROBO2Q9HCK4 1378 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 A0A087WUV0 522 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 SYF2O95926 243 aaKnown RBP12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 CCDC91Q7Z6B0 441 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 EXOC5O00471 708 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 TEX33O43247 280 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 SLC39A14Q15043 492 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 TNNI3KQ59H18 835 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 EHD4Q9H223 541 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 RAI14Q9P0K7 980 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 FPGT-TNNI3KV9GXZ4 949 aa12.65□□□□□ -0.38
SEMA4D-209ENST00000429836 CTAGE15A4D2H0 777 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 CTAGE9A4FU28 777 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 CTAGE8P0CG41 777 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 HOXC9P31274 260 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 CCT5P48643 541 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 HAND2P61296 217 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 CTAGE6Q86UF2 777 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 CTAGE4Q8IX94 777 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 STK11IPQ8N1F8 1099 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 ACRBPQ8NEB7 543 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 GOLGA8BA8MQT2 603 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 AKR1B15C9JRZ8 316 aaPredicted RBP12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 ERLIN2O94905 339 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 MNAT1P51948 309 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 IGSF22Q8N9C0 903 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 MED4Q9NPJ6 270 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 NRXN3Q9Y4C0 1643 aa12.64□□□□□ -0.39
SEMA4D-209ENST00000429836 KLF18A0A0U1RQI7 1052 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 GOLIM4O00461 696 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 RBL2Q08999 1139 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 SWT1Q5T5J6 900 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 MSL3Q8N5Y2 521 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 LINS1Q8NG48 757 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 MED15Q96RN5 788 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms