RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 LRRC8AQ8IWT6 810 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 TRERF1Q96PN7 1200 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 DENND2AQ9ULE3 1009 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 CAMTA1Q9Y6Y1 1673 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 SMTNL1A8MU46 457 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 ZNF202O95125 648 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 UBASH3AP57075 661 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 SETQ01105 290 aaPredicted RBP9.3□□□□□ -0.92
HPS4-205ENST00000429411 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
HPS4-205ENST00000429411 VPS37DQ86XT2 251 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 TDRD7Q8NHU6 1098 aaKnown RBP9.3□□□□□ -0.92
HPS4-205ENST00000429411 LRP2BPQ9P2M1 347 aa9.3□□□□□ -0.92
HPS4-205ENST00000429411 SLC12A7Q9Y666 1083 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 VGLL3A8MV65 326 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 TXNRD1Q16881 649 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 CARMIL3Q8ND23 1372 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 MED23Q9ULK4 1368 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 ANKRD18BA2A2Z9 1011 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 POLR3GO15318 223 aaPredicted RBP9.29□□□□□ -0.92
HPS4-205ENST00000429411 ZBTB43O43298 467 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 CTDNEP1O95476 244 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 TOP1P11387 765 aaKnown RBP9.29□□□□□ -0.92
HPS4-205ENST00000429411 PNOCQ13519 176 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 ZNF827Q17R98 1081 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 MYSM1Q5VVJ2 828 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 NAA16Q6N069 864 aaPredicted RBP9.29□□□□□ -0.92
HPS4-205ENST00000429411 KCNG4Q8TDN1 519 aa9.29□□□□□ -0.92
HPS4-205ENST00000429411 PXDNLA1KZ92 1463 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 ITGA6P23229 1130 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 ANO1Q5XXA6 986 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 LLPHQ9BRT6 129 aaKnown RBP9.28□□□□□ -0.92
HPS4-205ENST00000429411 DSCC1Q9BVC3 393 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 UTP14AQ9BVJ6 771 aaKnown RBP9.28□□□□□ -0.92
HPS4-205ENST00000429411 KCNJ14Q9UNX9 436 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 PAXBP1Q9Y5B6 917 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 ATP1A3P13637 1013 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 PFKFB1P16118 471 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 AFMP43652 599 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 STX17P56962 302 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 TRMT44Q8IYL2 757 aaKnown RBP9.28□□□□□ -0.92
HPS4-205ENST00000429411 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 RGS22Q8NE09 1264 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 AK7Q96M32 723 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 RCOR1Q9UKL0 485 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 STARD3NLO95772 234 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 RFX5P48382 616 aaPredicted RBP9.28□□□□□ -0.92
HPS4-205ENST00000429411 SMAP1Q8IYB5 467 aaPredicted RBP9.28□□□□□ -0.92
HPS4-205ENST00000429411 MAGEB6Q8N7X4 407 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 UBXN4Q92575 508 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 SPTLC3Q9NUV7 552 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 STK32BQ9NY57 414 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 RAI14Q9P0K7 980 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 KIAA1468Q9P260 1216 aa9.28□□□□□ -0.92
HPS4-205ENST00000429411 CLGNO14967 610 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 GNPATO15228 680 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 SART3Q15020 963 aaKnown RBP9.27□□□□□ -0.93
HPS4-205ENST00000429411 TEX35Q5T0J7 233 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 ATG9AQ7Z3C6 839 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 APPBP2Q92624 585 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 ARMT1Q9H993 441 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 CGNQ9P2M7 1197 aaKnown RBP9.27□□□□□ -0.93
HPS4-205ENST00000429411 COL15A1P39059 1388 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 CDKL5O76039 1030 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 CAVIN2O95810 425 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 ERCC6LQ2NKX8 1250 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 KRT40Q6A162 431 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 CCDC191Q8NCU4 936 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 PIGBQ92521 554 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 STAMQ92783 540 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 UBAC1Q9BSL1 405 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 GREM2Q9H772 168 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 ZNF219Q9P2Y4 722 aaPredicted RBP9.27□□□□□ -0.93
HPS4-205ENST00000429411 JAG2Q9Y219 1238 aa9.27□□□□□ -0.93
HPS4-205ENST00000429411 UBE2Q2LH0YL09 131 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 IRS4O14654 1257 aaPredicted RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 RANBP6O60518 1105 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 MBD4O95243 580 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 GSDMDP57764 484 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 FOXO4P98177 505 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 SSRP1Q08945 709 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 NCBP1Q09161 790 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 PLA2G4DQ86XP0 818 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 FBXO18Q8NFZ0 1043 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 CDCA7Q9BWT1 371 aaPredicted RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 ZNF532Q9HCE3 1301 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 COL5A2P05997 1499 aaPredicted RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 COBLO75128 1261 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 FANCCQ00597 558 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 KARSQ15046 597 aaKnown RBP9.26□□□□□ -0.93
HPS4-205ENST00000429411 SKIDA1Q1XH10 827 aa9.26□□□□□ -0.93
HPS4-205ENST00000429411 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms