RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PODNQ7Z5L7 613 aa10.61□□□□□ -0.71
SMC6-204ENST00000428868 IFNL3Q8IZI9 196 aa10.61□□□□□ -0.71
SMC6-204ENST00000428868 LARGE2Q8N3Y3 721 aa10.61□□□□□ -0.71
SMC6-204ENST00000428868 JAKMIP1Q96N16 626 aaKnown RBP10.61□□□□□ -0.71
SMC6-204ENST00000428868 TAOK3Q9H2K8 898 aa10.61□□□□□ -0.71
SMC6-204ENST00000428868 SLC4A4Q9Y6R1 1079 aa10.61□□□□□ -0.71
SMC6-204ENST00000428868 ATAD5Q96QE3 1844 aa10.61□□□□□ -0.71
SMC6-204ENST00000428868 GAKO14976 1311 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 MYH4Q9Y623 1939 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 CYP2D7A0A087X1C5 515 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 RAD17O75943 681 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 CASTP20810 708 aaKnown RBP10.6□□□□□ -0.71
SMC6-204ENST00000428868 BTDP43251 543 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 TBC1D10CQ8IV04 446 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 SH3RF3Q8TEJ3 882 aaPredicted RBP10.6□□□□□ -0.71
SMC6-204ENST00000428868 TBC1D22AQ8WUA7 517 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 TCEANC2Q96MN5 208 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 TTC14Q96N46 770 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 TTF2Q9UNY4 1162 aaKnown RBP10.6□□□□□ -0.71
SMC6-204ENST00000428868 DAGLAQ9Y4D2 1042 aa10.6□□□□□ -0.71
SMC6-204ENST00000428868 UTRNP46939 3433 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 GREB1LQ9C091 1923 aaPredicted RBP10.59□□□□□ -0.71
SMC6-204ENST00000428868 USP17L3A6NCW0 530 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 USP17L4A6NCW7 530 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 PATL2C9JE40 543 aaKnown RBP10.59□□□□□ -0.71
SMC6-204ENST00000428868 PSMD14O00487 310 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 APPP05067 770 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 NEK4P51957 841 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 CTDSPL2Q05D32 466 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 GRIPAP1Q4V328 841 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 SOGA3Q5TF21 947 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 STRIP1Q5VSL9 837 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 NOL8Q76FK4 1167 aaKnown RBP10.59□□□□□ -0.71
SMC6-204ENST00000428868 USP17L1Q7RTZ2 530 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 SNX21Q969T3 373 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 LARP6Q9BRS8 491 aaKnown RBP10.59□□□□□ -0.71
SMC6-204ENST00000428868 INCENPQ9NQS7 918 aa10.59□□□□□ -0.71
SMC6-204ENST00000428868 ZMYM6O95789 1325 aa10.58□□□□□ -0.71
SMC6-204ENST00000428868 NEDD4P46934 1319 aa10.58□□□□□ -0.71
SMC6-204ENST00000428868 GPR75-ASB3A0A0A6YYF3 556 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 E7EWF7 191 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 CYP2D6P10635 497 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 YBX3P16989 372 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMC6-204ENST00000428868 RHBDL3P58872 404 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 ALX1Q15699 326 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 SLC4A8Q2Y0W8 1093 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 TSGA10IPQ3SY00 556 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 STK11IPQ8N1F8 1099 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 NAPBQ9H115 298 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
SMC6-204ENST00000428868 MYH15Q9Y2K3 1946 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 LTBP3Q9NS15 1303 aa10.58□□□□□ -0.72
SMC6-204ENST00000428868 SHTN1A0MZ66 631 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 LARGE1O95461 756 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 ZKSCAN1P17029 563 aaPredicted RBP10.57□□□□□ -0.72
SMC6-204ENST00000428868 GNAT2P19087 354 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 RPS6KB1P23443 525 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 CRKP46108 304 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 TDO2P48775 406 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 AK2P54819 239 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 PPP4CP60510 307 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 FKBP1AP62942 108 aaKnown RBP10.57□□□□□ -0.72
SMC6-204ENST00000428868 GSTO1P78417 241 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 CXCL9Q07325 125 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 GPR162Q16538 588 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 NIM1KQ8IY84 436 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 LRRC2Q9BYS8 371 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 TM6SF1Q9BZW5 370 aa10.57□□□□□ -0.72
SMC6-204ENST00000428868 DCP1AQ9NPI6 582 aaPredicted RBP10.57□□□□□ -0.72
SMC6-204ENST00000428868 TCHHQ07283 1943 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 LDHCP07864 332 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 USP17L8P0C7I0 530 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 ANTXR2P58335 489 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 IMMTQ16891 758 aaKnown RBP10.56□□□□□ -0.72
SMC6-204ENST00000428868 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
SMC6-204ENST00000428868 CTR9Q6PD62 1173 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 RUFY3Q7L099 469 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 CHST3Q7LGC8 479 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 MAPKAPK5Q8IW41 473 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 HSCBQ8IWL3 235 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 TGFBRAP1Q8WUH2 860 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
SMC6-204ENST00000428868 NEK1Q96PY6 1258 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 GMLQ99445 158 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 CRNKL1Q9BZJ0 848 aaKnown RBP10.56□□□□□ -0.72
SMC6-204ENST00000428868 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
SMC6-204ENST00000428868 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 MKRN1Q9UHC7 482 aaKnown RBP10.56□□□□□ -0.72
SMC6-204ENST00000428868 ZNRF3Q9ULT6 936 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 SUGT1Q9Y2Z0 365 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 ZNF541Q9H0D2 1346 aa10.56□□□□□ -0.72
SMC6-204ENST00000428868 MINDY4BA8MYZ0 360 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
SMC6-204ENST00000428868 ZNF213O14771 459 aa10.55□□□□□ -0.72
SMC6-204ENST00000428868 DTNBO60941 627 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms