RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ZBED3Q96IU2 234 aaPredicted RBP17.65■□□□□ 0.42
SGCE-204ENST00000428696 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
SGCE-204ENST00000428696 TRIM6-TRIM34B2RNG4 842 aa17.64■□□□□ 0.42
SGCE-204ENST00000428696 CDC42EP5Q6NZY7 148 aa17.64■□□□□ 0.42
SGCE-204ENST00000428696 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.42
SGCE-204ENST00000428696 PI4K2BQ8TCG2 481 aa17.64■□□□□ 0.42
SGCE-204ENST00000428696 ZNF384Q8TF68 577 aa17.64■□□□□ 0.42
SGCE-204ENST00000428696 DEFB129Q9H1M3 183 aa17.64■□□□□ 0.42
SGCE-204ENST00000428696 MROH7-TTC4A0A0A0MT08 1334 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 BAG3O95817 575 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 TNNI2P48788 182 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 TCP10Q12799 353 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 SPDYE2Q495Y8 402 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 PLEKHM2Q8IWE5 1019 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 PPP4R2Q9NY27 417 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 AATFQ9NY61 560 aaKnown RBP eCLIP17.64■□□□□ 0.41
SGCE-204ENST00000428696 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.64■□□□□ 0.41
SGCE-204ENST00000428696 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
SGCE-204ENST00000428696 CELF2O95319 508 aaKnown RBP17.63■□□□□ 0.41
SGCE-204ENST00000428696 PICALMQ13492 652 aa17.63■□□□□ 0.41
SGCE-204ENST00000428696 PRKG1Q13976 671 aa17.63■□□□□ 0.41
SGCE-204ENST00000428696 RASA3Q14644 834 aa17.63■□□□□ 0.41
SGCE-204ENST00000428696 SLFNL1Q499Z3 407 aa17.63■□□□□ 0.41
SGCE-204ENST00000428696 CDCA5Q96FF9 252 aa17.63■□□□□ 0.41
SGCE-204ENST00000428696 FAM163AQ96GL9 167 aaPredicted RBP17.63■□□□□ 0.41
SGCE-204ENST00000428696 PITPNM2Q9BZ72 1349 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 ZNF646O15015 1829 aaPredicted RBP17.62■□□□□ 0.41
SGCE-204ENST00000428696 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 PDE6AP16499 860 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 PDE4AP27815 886 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 DYNLL1P63167 89 aaKnown RBP17.62■□□□□ 0.41
SGCE-204ENST00000428696 TNFAIP1Q13829 316 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 TTLL12Q14166 644 aaPredicted RBP17.62■□□□□ 0.41
SGCE-204ENST00000428696 ZSCAN25Q6NSZ9 544 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 ZNF532Q9HCE3 1301 aa17.62■□□□□ 0.41
SGCE-204ENST00000428696 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
SGCE-204ENST00000428696 ZSCAN29Q8IWY8 852 aaPredicted RBP17.61■□□□□ 0.41
SGCE-204ENST00000428696 TEX11Q8IYF3 940 aa17.61■□□□□ 0.41
SGCE-204ENST00000428696 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
SGCE-204ENST00000428696 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
SGCE-204ENST00000428696 ABT1Q9ULW3 272 aaKnown RBP17.61■□□□□ 0.41
SGCE-204ENST00000428696 GAKO14976 1311 aa17.61■□□□□ 0.41
SGCE-204ENST00000428696 MAGEB6P1A0A0J9YX57 407 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 CHGBP05060 677 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 NF2P35240 595 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 HTRA3P83110 453 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 ERICH6BQ5W0A0 696 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 SKAP1Q86WV1 359 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 KBTBD3Q8NAB2 608 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 SALL3Q9BXA9 1300 aa17.6■□□□□ 0.41
SGCE-204ENST00000428696 APLP1P51693 650 aa17.59■□□□□ 0.41
SGCE-204ENST00000428696 NFIAQ12857 509 aa17.59■□□□□ 0.41
SGCE-204ENST00000428696 LRRFIP1Q32MZ4 808 aaKnown RBP17.59■□□□□ 0.41
SGCE-204ENST00000428696 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
SGCE-204ENST00000428696 ADAMTSL1Q8N6G6 1762 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 TMEM88BA6NKF7 163 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 PLCG2P16885 1265 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 HSPA6P17066 643 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 ADD2P35612 726 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 RGS3P49796 1198 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 SUPT20HL1Q3ZLR7 823 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.41
SGCE-204ENST00000428696 CST9Q5W186 159 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 PAXIP1Q6ZW49 1069 aaPredicted RBP17.58■□□□□ 0.41
SGCE-204ENST00000428696 EVI5LQ96CN4 794 aa17.58■□□□□ 0.41
SGCE-204ENST00000428696 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
SGCE-204ENST00000428696 USP5P45974 858 aa17.57■□□□□ 0.4
SGCE-204ENST00000428696 C2orf69Q8N8R5 385 aa17.57■□□□□ 0.4
SGCE-204ENST00000428696 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
SGCE-204ENST00000428696 PASKQ96RG2 1323 aa17.57■□□□□ 0.4
SGCE-204ENST00000428696 IGSF3O75054 1194 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 RHBDL3P58872 404 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 GRM1Q13255 1194 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 MAPKAPK5Q8IW41 473 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 ZFPM1Q8IX07 1006 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 FAM151AQ8WW52 585 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 ARMT1Q9H993 441 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 FAM198AQ9UFP1 575 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 PPP2R3BQ9Y5P8 575 aa17.56■□□□□ 0.4
SGCE-204ENST00000428696 TCRBV5S4A2TA0A5A2 114 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 MBD4O95243 580 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 PPP4CP60510 307 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 SLC4A8Q2Y0W8 1093 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 FKBP1CQ5VVH2 108 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 MOB2Q70IA6 237 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 CDAN1Q8IWY9 1227 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 AIDAQ96BJ3 306 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 OSBPL3Q9H4L5 887 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 SAP30BPQ9UHR5 308 aaKnown RBP17.55■□□□□ 0.4
SGCE-204ENST00000428696 FZD1Q9UP38 647 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
SGCE-204ENST00000428696 MYH2Q9UKX2 1941 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 WDHD1O75717 1129 aaPredicted RBP17.55■□□□□ 0.4
SGCE-204ENST00000428696 ZFYP08048 801 aaPredicted RBP17.55■□□□□ 0.4
SGCE-204ENST00000428696 UBE3CQ15386 1083 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 MIGA2Q7L4E1 593 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 FAM83AQ86UY5 434 aa17.55■□□□□ 0.4
SGCE-204ENST00000428696 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms