RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 TNFAIP1Q13829 316 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 CCDC158Q5M9N0 1113 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 ERC1Q8IUD2 1116 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 ZNF384Q8TF68 577 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 USP40Q9NVE5 1235 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 TMOD2Q9NZR1 351 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 NDUFB9Q9Y6M9 179 aa18.26■□□□□ 0.51
RTN4-210ENST00000427710 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
RTN4-210ENST00000427710 TNNI2P48788 182 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 MECOMQ03112 1051 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 TCP10Q12799 353 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 NFIAQ12857 509 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 NOGQ13253 232 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 SUPT20HL1Q3ZLR7 823 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 COL13A1Q5TAT6 717 aaPredicted RBP18.25■□□□□ 0.51
RTN4-210ENST00000427710 SPTY2D1Q68D10 685 aaPredicted RBP18.25■□□□□ 0.51
RTN4-210ENST00000427710 CLMNQ96JQ2 1002 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 RAI14Q9P0K7 980 aa18.25■□□□□ 0.51
RTN4-210ENST00000427710 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
RTN4-210ENST00000427710 HSPA8P11142 646 aaKnown RBP18.24■□□□□ 0.51
RTN4-210ENST00000427710 ZAP70P43403 619 aa18.24■□□□□ 0.51
RTN4-210ENST00000427710 LBX1P52954 281 aa18.24■□□□□ 0.51
RTN4-210ENST00000427710 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
RTN4-210ENST00000427710 CRBNQ96SW2 442 aa18.24■□□□□ 0.51
RTN4-210ENST00000427710 GAKO14976 1311 aa18.23■□□□□ 0.51
RTN4-210ENST00000427710 MAST2Q6P0Q8 1798 aa18.23■□□□□ 0.51
RTN4-210ENST00000427710 PPP1R12BO60237 982 aaPredicted RBP18.23■□□□□ 0.51
RTN4-210ENST00000427710 CYP2E1P05181 493 aaPredicted RBP18.23■□□□□ 0.51
RTN4-210ENST00000427710 BTDP43251 543 aa18.23■□□□□ 0.51
RTN4-210ENST00000427710 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
RTN4-210ENST00000427710 ZFPM1Q8IX07 1006 aa18.23■□□□□ 0.51
RTN4-210ENST00000427710 DOCK2Q92608 1830 aa18.23■□□□□ 0.51
RTN4-210ENST00000427710 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
RTN4-210ENST00000427710 SMARCA5O60264 1052 aaPredicted RBP18.22■□□□□ 0.51
RTN4-210ENST00000427710 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
RTN4-210ENST00000427710 NSUN4Q96CB9 384 aaKnown RBP18.22■□□□□ 0.51
RTN4-210ENST00000427710 KIF1BPQ96EK5 621 aa18.22■□□□□ 0.51
RTN4-210ENST00000427710 BEGAINQ9BUH8 593 aa18.22■□□□□ 0.51
RTN4-210ENST00000427710 PIH1D3Q9NQM4 214 aaKnown RBP18.22■□□□□ 0.51
RTN4-210ENST00000427710 LRP2BPQ9P2M1 347 aa18.22■□□□□ 0.51
RTN4-210ENST00000427710 FAM198AQ9UFP1 575 aa18.22■□□□□ 0.51
RTN4-210ENST00000427710 MAP3K11Q16584 847 aa18.21■□□□□ 0.51
RTN4-210ENST00000427710 FAM83AQ86UY5 434 aa18.21■□□□□ 0.51
RTN4-210ENST00000427710 CSRNP1Q96S65 589 aa18.21■□□□□ 0.51
RTN4-210ENST00000427710 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
RTN4-210ENST00000427710 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
RTN4-210ENST00000427710 FKBP1CQ5VVH2 108 aa18.2■□□□□ 0.5
RTN4-210ENST00000427710 SLC10A4Q96EP9 437 aa18.2■□□□□ 0.5
RTN4-210ENST00000427710 ZNF512BQ96KM6 892 aaPredicted RBP18.2■□□□□ 0.5
RTN4-210ENST00000427710 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
RTN4-210ENST00000427710 RGS3P49796 1198 aa18.19■□□□□ 0.5
RTN4-210ENST00000427710 PICALMQ13492 652 aa18.19■□□□□ 0.5
RTN4-210ENST00000427710 MIGA2Q7L4E1 593 aa18.19■□□□□ 0.5
RTN4-210ENST00000427710 SLF2Q8IX21 1173 aa18.19■□□□□ 0.5
RTN4-210ENST00000427710 CLASRPQ8N2M8 674 aaKnown RBP18.19■□□□□ 0.5
RTN4-210ENST00000427710 FAM151AQ8WW52 585 aa18.19■□□□□ 0.5
RTN4-210ENST00000427710 FAM163AQ96GL9 167 aaPredicted RBP18.19■□□□□ 0.5
RTN4-210ENST00000427710 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
RTN4-210ENST00000427710 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
RTN4-210ENST00000427710 DDX4Q9NQI0 724 aaKnown RBP18.19■□□□□ 0.5
RTN4-210ENST00000427710 GPR75-ASB3A0A0A6YYF3 556 aa18.18■□□□□ 0.5
RTN4-210ENST00000427710 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
RTN4-210ENST00000427710 SLURP2P0DP57 97 aa18.18■□□□□ 0.5
RTN4-210ENST00000427710 GJA5P36382 358 aa18.18■□□□□ 0.5
RTN4-210ENST00000427710 RHBDL3P58872 404 aa18.18■□□□□ 0.5
RTN4-210ENST00000427710 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
RTN4-210ENST00000427710 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
RTN4-210ENST00000427710 WNK4Q96J92 1243 aa18.18■□□□□ 0.5
RTN4-210ENST00000427710 MYH7P12883 1935 aa18.17■□□□□ 0.5
RTN4-210ENST00000427710 FOCADQ5VW36 1801 aa18.17■□□□□ 0.5
RTN4-210ENST00000427710 WDHD1O75717 1129 aaPredicted RBP18.17■□□□□ 0.5
RTN4-210ENST00000427710 TRPA1O75762 1119 aa18.17■□□□□ 0.5
RTN4-210ENST00000427710 LDHCP07864 332 aa18.17■□□□□ 0.5
RTN4-210ENST00000427710 GSTO1P78417 241 aa18.17■□□□□ 0.5
RTN4-210ENST00000427710 NAA16Q6N069 864 aaPredicted RBP18.17■□□□□ 0.5
RTN4-210ENST00000427710 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.17■□□□□ 0.5
RTN4-210ENST00000427710 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
RTN4-210ENST00000427710 RFX7Q2KHR2 1363 aa18.17■□□□□ 0.5
RTN4-210ENST00000427710 RPAP1Q9BWH6 1393 aaPredicted RBP18.17■□□□□ 0.5
RTN4-210ENST00000427710 MYH1P12882 1939 aa18.16■□□□□ 0.5
RTN4-210ENST00000427710 IDH1O75874 414 aaKnown RBP18.16■□□□□ 0.5
RTN4-210ENST00000427710 MAP3K9P80192 1104 aa18.16■□□□□ 0.5
RTN4-210ENST00000427710 SH3BP5LQ7L8J4 393 aa18.16■□□□□ 0.5
RTN4-210ENST00000427710 ANKRD13AQ8IZ07 590 aa18.16■□□□□ 0.5
RTN4-210ENST00000427710 RNF186Q9NXI6 227 aa18.16■□□□□ 0.5
RTN4-210ENST00000427710 AATFQ9NY61 560 aaKnown RBP eCLIP18.16■□□□□ 0.5
RTN4-210ENST00000427710 LAMB1P07942 1786 aa18.16■□□□□ 0.5
RTN4-210ENST00000427710 VGLL4Q14135 290 aa18.15■□□□□ 0.5
RTN4-210ENST00000427710 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
RTN4-210ENST00000427710 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.15■□□□□ 0.5
RTN4-210ENST00000427710 SH3RF3Q8TEJ3 882 aaPredicted RBP18.15■□□□□ 0.5
RTN4-210ENST00000427710 ZKSCAN4Q969J2 545 aaPredicted RBP18.15■□□□□ 0.5
RTN4-210ENST00000427710 EDC3Q96F86 508 aaKnown RBP18.15■□□□□ 0.5
RTN4-210ENST00000427710 WRNIP1Q96S55 665 aa18.15■□□□□ 0.5
RTN4-210ENST00000427710 DNAJC2Q99543 621 aaKnown RBP18.15■□□□□ 0.5
RTN4-210ENST00000427710 IDI2Q9BXS1 227 aa18.15■□□□□ 0.5
RTN4-210ENST00000427710 LRRCC1Q9C099 1032 aa18.15■□□□□ 0.5
RTN4-210ENST00000427710 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms