RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 INPP5BP32019 993 aa11.88□□□□□ -0.51
LSG1-202ENST00000427461 TNNI2P48788 182 aa11.88□□□□□ -0.51
LSG1-202ENST00000427461 FKBP1AP62942 108 aaKnown RBP11.88□□□□□ -0.51
LSG1-202ENST00000427461 PPATQ06203 517 aa11.88□□□□□ -0.51
LSG1-202ENST00000427461 CHRNDQ07001 517 aa11.88□□□□□ -0.51
LSG1-202ENST00000427461 TRIM32Q13049 653 aa11.88□□□□□ -0.51
LSG1-202ENST00000427461 IRF5Q13568 498 aa11.88□□□□□ -0.51
LSG1-202ENST00000427461 TJAP1Q5JTD0 557 aa11.88□□□□□ -0.51
LSG1-202ENST00000427461 TTF2Q9UNY4 1162 aaKnown RBP11.88□□□□□ -0.51
LSG1-202ENST00000427461 DNAH12Q6ZR08 3092 aa11.87□□□□□ -0.51
LSG1-202ENST00000427461 CHL1O00533 1208 aa11.87□□□□□ -0.51
LSG1-202ENST00000427461 GPAT2Q6NUI2 795 aa11.87□□□□□ -0.51
LSG1-202ENST00000427461 MIGA2Q7L4E1 593 aa11.87□□□□□ -0.51
LSG1-202ENST00000427461 USP38Q8NB14 1042 aa11.87□□□□□ -0.51
LSG1-202ENST00000427461 PARK7Q99497 189 aaKnown RBP11.87□□□□□ -0.51
LSG1-202ENST00000427461 TTYH1Q9H313 450 aaPredicted RBP11.87□□□□□ -0.51
LSG1-202ENST00000427461 KCNH4Q9UQ05 1017 aa11.87□□□□□ -0.51
LSG1-202ENST00000427461 FOSL2P15408 326 aa11.86□□□□□ -0.51
LSG1-202ENST00000427461 LRRC26Q2I0M4 334 aa11.86□□□□□ -0.51
LSG1-202ENST00000427461 MPHOSPH8Q99549 860 aa11.86□□□□□ -0.51
LSG1-202ENST00000427461 METTL22Q9BUU2 404 aaPredicted RBP11.86□□□□□ -0.51
LSG1-202ENST00000427461 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
LSG1-202ENST00000427461 A0A1B0GUL6 1792 aa11.86□□□□□ -0.51
LSG1-202ENST00000427461 ITGA6P23229 1130 aa11.85□□□□□ -0.51
LSG1-202ENST00000427461 CRKP46108 304 aa11.85□□□□□ -0.51
LSG1-202ENST00000427461 GRIK5Q16478 980 aa11.85□□□□□ -0.51
LSG1-202ENST00000427461 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
LSG1-202ENST00000427461 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
LSG1-202ENST00000427461 ZNF804AQ7Z570 1209 aa11.85□□□□□ -0.51
LSG1-202ENST00000427461 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
LSG1-202ENST00000427461 IGKV5-2P06315 115 aa11.84□□□□□ -0.51
LSG1-202ENST00000427461 TMPOP42166 694 aaKnown RBP11.84□□□□□ -0.51
LSG1-202ENST00000427461 C15orf52Q6ZUT6 534 aaKnown RBP11.84□□□□□ -0.51
LSG1-202ENST00000427461 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
LSG1-202ENST00000427461 OGDHLQ9ULD0 1010 aa11.84□□□□□ -0.51
LSG1-202ENST00000427461 HOXB7P09629 217 aa11.83□□□□□ -0.52
LSG1-202ENST00000427461 NEUROD2Q15784 382 aa11.83□□□□□ -0.52
LSG1-202ENST00000427461 ZNF341Q9BYN7 854 aa11.83□□□□□ -0.52
LSG1-202ENST00000427461 HMGCRP04035 888 aa11.82□□□□□ -0.52
LSG1-202ENST00000427461 COL6A1P12109 1028 aa11.82□□□□□ -0.52
LSG1-202ENST00000427461 SHHQ15465 462 aa11.82□□□□□ -0.52
LSG1-202ENST00000427461 CWF19L2Q2TBE0 894 aaKnown RBP11.82□□□□□ -0.52
LSG1-202ENST00000427461 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
LSG1-202ENST00000427461 COA7Q96BR5 231 aa11.82□□□□□ -0.52
LSG1-202ENST00000427461 LBHD1Q9BQE6 289 aaPredicted RBP11.82□□□□□ -0.52
LSG1-202ENST00000427461 MAP3K2Q9Y2U5 619 aa11.82□□□□□ -0.52
LSG1-202ENST00000427461 C9orf50Q5SZB4 431 aa11.81□□□□□ -0.52
LSG1-202ENST00000427461 DCAF15Q66K64 600 aa11.81□□□□□ -0.52
LSG1-202ENST00000427461 UBE3BQ7Z3V4 1068 aa11.81□□□□□ -0.52
LSG1-202ENST00000427461 ANKRD13CQ8N6S4 541 aa11.81□□□□□ -0.52
LSG1-202ENST00000427461 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
LSG1-202ENST00000427461 AK9Q5TCS8 1911 aa11.8□□□□□ -0.52
LSG1-202ENST00000427461 ELL2O00472 640 aaPredicted RBP11.8□□□□□ -0.52
LSG1-202ENST00000427461 PLIN1O60240 522 aa11.8□□□□□ -0.52
LSG1-202ENST00000427461 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
LSG1-202ENST00000427461 GADL1Q6ZQY3 521 aa11.8□□□□□ -0.52
LSG1-202ENST00000427461 ZNF112Q9UJU3 913 aa11.8□□□□□ -0.52
LSG1-202ENST00000427461 LTBP2Q14767 1821 aa11.8□□□□□ -0.52
LSG1-202ENST00000427461 H7C1W4 665 aa11.79□□□□□ -0.52
LSG1-202ENST00000427461 FAM83AQ86UY5 434 aa11.79□□□□□ -0.52
LSG1-202ENST00000427461 TDRD7Q8NHU6 1098 aaKnown RBP11.79□□□□□ -0.52
LSG1-202ENST00000427461 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
LSG1-202ENST00000427461 TRIB2Q92519 343 aa11.79□□□□□ -0.52
LSG1-202ENST00000427461 SYNGAP1Q96PV0 1343 aa11.79□□□□□ -0.52
LSG1-202ENST00000427461 MAST2Q6P0Q8 1798 aa11.79□□□□□ -0.52
LSG1-202ENST00000427461 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
LSG1-202ENST00000427461 A0A0G2JLL6 359 aaPredicted RBP11.78□□□□□ -0.52
LSG1-202ENST00000427461 PI4KAP2A4QPH2 592 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 NEURL1BA8MQ27 555 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 CXCL11O14625 94 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 CSF1RP07333 972 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 GYG1P46976 350 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 PRRT2Q7Z6L0 340 aaPredicted RBP11.78□□□□□ -0.52
LSG1-202ENST00000427461 PI4KAP1Q8N8J0 262 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 ADAMTS19Q8TE59 1207 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 HOOK2Q96ED9 719 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 GJD2Q9UKL4 321 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 PTPRFP10586 1907 aa11.78□□□□□ -0.52
LSG1-202ENST00000427461 ANKRD18BA2A2Z9 1011 aa11.77□□□□□ -0.53
LSG1-202ENST00000427461 DDX58O95786 925 aaKnown RBP11.77□□□□□ -0.53
LSG1-202ENST00000427461 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
LSG1-202ENST00000427461 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
LSG1-202ENST00000427461 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.53
LSG1-202ENST00000427461 APOBEC3HQ6NTF7 200 aaKnown RBP11.77□□□□□ -0.53
LSG1-202ENST00000427461 FASTKD5Q7L8L6 764 aaKnown RBP11.77□□□□□ -0.53
LSG1-202ENST00000427461 PPM1EQ8WY54 764 aa11.77□□□□□ -0.53
LSG1-202ENST00000427461 PLA2G12BQ9BX93 195 aa11.77□□□□□ -0.53
LSG1-202ENST00000427461 MBIPQ9NS73 344 aa11.77□□□□□ -0.53
LSG1-202ENST00000427461 TMOD2Q9NZR1 351 aa11.77□□□□□ -0.53
LSG1-202ENST00000427461 IQSEC3Q9UPP2 1182 aaPredicted RBP11.77□□□□□ -0.53
LSG1-202ENST00000427461 ZHX2Q9Y6X8 837 aa11.77□□□□□ -0.53
LSG1-202ENST00000427461 CYP2B6P20813 491 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 CASP7P55210 303 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
LSG1-202ENST00000427461 TCP10Q12799 353 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 MAP3K21Q5TCX8 1036 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 CCDC146Q8IYE0 955 aa11.76□□□□□ -0.53
LSG1-202ENST00000427461 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms