RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
LINC01238-202ENST00000426962 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 CCDC158Q5M9N0 1113 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 CDAN1Q8IWY9 1227 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 SPATA5Q8NB90 893 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 FAM151AQ8WW52 585 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 CHMP4BQ9H444 224 aaKnown RBP13.25□□□□□ -0.29
LINC01238-202ENST00000426962 USP40Q9NVE5 1235 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 HMG20BQ9P0W2 317 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
LINC01238-202ENST00000426962 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
LINC01238-202ENST00000426962 DZIP1Q86YF9 867 aaKnown RBP13.24□□□□□ -0.29
LINC01238-202ENST00000426962 RPAP2Q8IXW5 612 aaPredicted RBP13.24□□□□□ -0.29
LINC01238-202ENST00000426962 WNK4Q96J92 1243 aa13.24□□□□□ -0.29
LINC01238-202ENST00000426962 COG6Q9Y2V7 657 aa13.24□□□□□ -0.29
LINC01238-202ENST00000426962 GAKO14976 1311 aa13.23□□□□□ -0.29
LINC01238-202ENST00000426962 MCAMP43121 646 aa13.23□□□□□ -0.29
LINC01238-202ENST00000426962 MECOMQ03112 1051 aa13.23□□□□□ -0.29
LINC01238-202ENST00000426962 TCP10Q12799 353 aa13.23□□□□□ -0.29
LINC01238-202ENST00000426962 TTC39AQ5SRH9 613 aa13.23□□□□□ -0.29
LINC01238-202ENST00000426962 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.23□□□□□ -0.29
LINC01238-202ENST00000426962 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
LINC01238-202ENST00000426962 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
LINC01238-202ENST00000426962 CAPN15O75808 1086 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 TBC1D8O95759 1140 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 ALDH1A1P00352 501 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 LDHCP07864 332 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 GSTO1P78417 241 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 NFIAQ12857 509 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 HSP90AB4PQ58FF6 505 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 DCAF15Q66K64 600 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 PI16Q6UXB8 463 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC01238-202ENST00000426962 ZNF512BQ96KM6 892 aaPredicted RBP13.22□□□□□ -0.29
LINC01238-202ENST00000426962 DBNDD2Q9BQY9 259 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 IDI2Q9BXS1 227 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 ELP3Q9H9T3 547 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 FAM198AQ9UFP1 575 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 CSADQ9Y600 493 aa13.22□□□□□ -0.29
LINC01238-202ENST00000426962 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 GPR75-ASB3A0A0A6YYF3 556 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 GJA5P36382 358 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 VGLL4Q14135 290 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 MIGA2Q7L4E1 593 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
LINC01238-202ENST00000426962 EAF2Q96CJ1 260 aaPredicted RBP13.21□□□□□ -0.29
LINC01238-202ENST00000426962 OPTNQ96CV9 577 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 ZNF341Q9BYN7 854 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 CCDC8Q9H0W5 538 aaPredicted RBP13.21□□□□□ -0.29
LINC01238-202ENST00000426962 RAI14Q9P0K7 980 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 LRP2BPQ9P2M1 347 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
LINC01238-202ENST00000426962 AKAP11Q9UKA4 1901 aa13.21□□□□□ -0.3
LINC01238-202ENST00000426962 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
LINC01238-202ENST00000426962 MROH7-TTC4A0A0A0MT08 1334 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
LINC01238-202ENST00000426962 HMMRO75330 724 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 ENTPD3O75355 529 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 BTDP43251 543 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 DGKZQ13574 1117 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
LINC01238-202ENST00000426962 OTUD7BQ6GQQ9 843 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 ZNF384Q8TF68 577 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 ABHD8Q96I13 439 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
LINC01238-202ENST00000426962 IGSF3O75054 1194 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
LINC01238-202ENST00000426962 RGS3P49796 1198 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 ZFPM1Q8IX07 1006 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 ZKSCAN4Q969J2 545 aaPredicted RBP13.19□□□□□ -0.3
LINC01238-202ENST00000426962 MS4A4AQ96JQ5 239 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 ZNF112Q9UJU3 913 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
LINC01238-202ENST00000426962 CASP8AP2Q9UKL3 1982 aa13.19□□□□□ -0.3
LINC01238-202ENST00000426962 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 GPR25O00155 361 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
LINC01238-202ENST00000426962 WDHD1O75717 1129 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-202ENST00000426962 CYP2E1P05181 493 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-202ENST00000426962 GTF2A2P52657 109 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 RHBDL3P58872 404 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 ERO1BQ86YB8 467 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 ZNF296Q8WUU4 475 aaPredicted RBP13.18□□□□□ -0.3
LINC01238-202ENST00000426962 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 PTPN18Q99952 460 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
LINC01238-202ENST00000426962 SNCAIPQ9Y6H5 919 aa13.18□□□□□ -0.3
LINC01238-202ENST00000426962 IGF2BP3O00425 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC01238-202ENST00000426962 RAB11FIP3O75154 756 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms