RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 RIOK1Q9BRS2 568 aaKnown RBP11.35□□□□□ -0.59
LINC01006-203ENST00000425712 CRNKL1Q9BZJ0 848 aaKnown RBP11.35□□□□□ -0.59
LINC01006-203ENST00000425712 AATFQ9NY61 560 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC01006-203ENST00000425712 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
LINC01006-203ENST00000425712 ECM29Q5VYK3 1845 aa11.35□□□□□ -0.59
LINC01006-203ENST00000425712 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 MYO1BO43795 1136 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 DDNO94850 711 aaPredicted RBP11.34□□□□□ -0.59
LINC01006-203ENST00000425712 CHGBP05060 677 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
LINC01006-203ENST00000425712 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
LINC01006-203ENST00000425712 MYOZ2Q9NPC6 264 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 TMOD2Q9NZR1 351 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
LINC01006-203ENST00000425712 SCN4AP35499 1836 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 ZMYM6O95789 1325 aa11.34□□□□□ -0.59
LINC01006-203ENST00000425712 KIF4BQ2VIQ3 1234 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 SLFNL1Q499Z3 407 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 TEX11Q8IYF3 940 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
LINC01006-203ENST00000425712 DSCC1Q9BVC3 393 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 NACAP1Q9BZK3 213 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 ARMT1Q9H993 441 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 UPF2Q9HAU5 1272 aaKnown RBP11.33□□□□□ -0.6
LINC01006-203ENST00000425712 ANO2Q9NQ90 1003 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 ADARB2Q9NS39 739 aaKnown RBP11.33□□□□□ -0.6
LINC01006-203ENST00000425712 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 NAV1Q8NEY1 1877 aa11.33□□□□□ -0.6
LINC01006-203ENST00000425712 FOCADQ5VW36 1801 aa11.32□□□□□ -0.6
LINC01006-203ENST00000425712 RHBDL3P58872 404 aa11.32□□□□□ -0.6
LINC01006-203ENST00000425712 DYNLL1P63167 89 aaKnown RBP11.32□□□□□ -0.6
LINC01006-203ENST00000425712 APOBEC3HQ6NTF7 200 aaKnown RBP11.32□□□□□ -0.6
LINC01006-203ENST00000425712 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
LINC01006-203ENST00000425712 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
LINC01006-203ENST00000425712 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
LINC01006-203ENST00000425712 BACH2Q9BYV9 841 aa11.32□□□□□ -0.6
LINC01006-203ENST00000425712 IL25Q9H293 177 aa11.32□□□□□ -0.6
LINC01006-203ENST00000425712 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
LINC01006-203ENST00000425712 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
LINC01006-203ENST00000425712 WNT10BO00744 389 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
LINC01006-203ENST00000425712 USP5P45974 858 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 AMOTL1Q8IY63 956 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 SH3RF3Q8TEJ3 882 aaPredicted RBP11.31□□□□□ -0.6
LINC01006-203ENST00000425712 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
LINC01006-203ENST00000425712 ATP8A2Q9NTI2 1148 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 USP40Q9NVE5 1235 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 CDK5RAP2Q96SN8 1893 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 COL2A1P02458 1487 aaPredicted RBP11.31□□□□□ -0.6
LINC01006-203ENST00000425712 LAMB1P07942 1786 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 UTRNP46939 3433 aa11.31□□□□□ -0.6
LINC01006-203ENST00000425712 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 SHTN1A0MZ66 631 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
LINC01006-203ENST00000425712 NPM3O75607 178 aaKnown RBP11.3□□□□□ -0.6
LINC01006-203ENST00000425712 APPP05067 770 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 MCCP23508 829 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 TDO2P48775 406 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 TNFAIP1Q13829 316 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
LINC01006-203ENST00000425712 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 CDC42EP5Q6NZY7 148 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 USP50Q70EL3 339 aaPredicted RBP11.3□□□□□ -0.6
LINC01006-203ENST00000425712 PRMT6Q96LA8 375 aaPredicted RBP11.3□□□□□ -0.6
LINC01006-203ENST00000425712 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 NAPBQ9H115 298 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
LINC01006-203ENST00000425712 CTNNA3Q9UI47 895 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
LINC01006-203ENST00000425712 FLT1P17948 1338 aa11.3□□□□□ -0.6
LINC01006-203ENST00000425712 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 WDHD1O75717 1129 aaPredicted RBP11.29□□□□□ -0.6
LINC01006-203ENST00000425712 EPHX2P34913 555 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 EPS15P42566 896 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 TNNI2P48788 182 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 ALX1Q15699 326 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 VPS53Q5VIR6 699 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 SAMD7Q7Z3H4 446 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 PNMA8AQ86V59 439 aaPredicted RBP11.29□□□□□ -0.6
LINC01006-203ENST00000425712 APOBEC3FQ8IUX4 373 aaKnown RBP11.29□□□□□ -0.6
LINC01006-203ENST00000425712 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 TGFBRAP1Q8WUH2 860 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 SDR42E1Q8WUS8 393 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 MAP4K1Q92918 833 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 TDRD3Q9H7E2 651 aaKnown RBP11.29□□□□□ -0.6
LINC01006-203ENST00000425712 EPB41L4AQ9HCS5 686 aaPredicted RBP11.29□□□□□ -0.6
LINC01006-203ENST00000425712 ZNF70Q9UC06 446 aaPredicted RBP11.29□□□□□ -0.6
LINC01006-203ENST00000425712 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 PITPNM2Q9BZ72 1349 aa11.29□□□□□ -0.6
LINC01006-203ENST00000425712 CLRN2A0PK11 232 aa11.28□□□□□ -0.6
LINC01006-203ENST00000425712 FOXP2O15409 715 aa11.28□□□□□ -0.6
LINC01006-203ENST00000425712 PRKAB2O43741 272 aa11.28□□□□□ -0.6
LINC01006-203ENST00000425712 ENTPD3O75355 529 aa11.28□□□□□ -0.6
LINC01006-203ENST00000425712 PICALMQ13492 652 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms