RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ZNF532Q9HCE3 1301 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 BCL9O00512 1426 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 UQCRFS1P1P0C7P4 283 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 ADD2P35612 726 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 ATP6V1AP38606 617 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 FAM160A1Q05DH4 1040 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 PUM3Q15397 648 aaKnown RBP15.05■□□□□ -0
COL12A1-205ENST00000425443 NFXL1Q6ZNB6 911 aa15.05■□□□□ -0
COL12A1-205ENST00000425443 MARCKSP29966 332 aaPredicted RBP15.04■□□□□ -0
COL12A1-205ENST00000425443 GNL2Q13823 731 aaKnown RBP15.04■□□□□ -0
COL12A1-205ENST00000425443 MRFAP1L1Q96HT8 127 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 PIH1D3Q9NQM4 214 aaKnown RBP15.04■□□□□ -0
COL12A1-205ENST00000425443 TOMM22Q9NS69 142 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 SHANK3Q9BYB0 1731 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 TOGARAM1Q9Y4F4 1720 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 LOC102724159A0A0B4J2E5 919 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 CCDC69A6NI79 296 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 ERVV-1B6SEH8 477 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 SKILP12757 684 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 SLC5A1P13866 664 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 PWP2Q15269 919 aaKnown RBP15.04■□□□□ -0
COL12A1-205ENST00000425443 DPCR1Q3MIW9 517 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 TAF3Q5VWG9 929 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 SYNE3Q6ZMZ3 975 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
COL12A1-205ENST00000425443 LPIN2Q92539 896 aa15.04■□□□□ -0
COL12A1-205ENST00000425443 SNAP23O00161 211 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 DDB1Q16531 1140 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 CEP135Q66GS9 1140 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 INCENPQ9NQS7 918 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 ABCC12Q96J65 1359 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 KIF28PB7ZC32 967 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 RBM6P78332 1123 aaKnown RBP15.03■□□□□ -0
COL12A1-205ENST00000425443 MB21D2Q8IYB1 491 aaPredicted RBP15.03■□□□□ -0
COL12A1-205ENST00000425443 RIC1Q4ADV7 1423 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 SPEF2Q9C093 1822 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 KDM4FA0A1W2PPD8 638 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 PDE6AP16499 860 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 ATL3Q6DD88 541 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 CPLX2Q6PUV4 134 aaKnown RBP15.03■□□□□ -0
COL12A1-205ENST00000425443 NYAP1Q6ZVC0 841 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 PLCD4Q9BRC7 762 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 MYL10Q9BUA6 226 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 HPS5Q9UPZ3 1129 aa15.03■□□□□ -0
COL12A1-205ENST00000425443 UBN2Q6ZU65 1347 aa15.02■□□□□ -0
COL12A1-205ENST00000425443 MROH5Q6ZUA9 1318 aa15.02■□□□□ -0
COL12A1-205ENST00000425443 ABCA3Q99758 1704 aa15.02■□□□□ -0
COL12A1-205ENST00000425443 STRCQ7RTU9 1775 aa15.02■□□□□ -0
COL12A1-205ENST00000425443 MAP3K12Q12852 859 aa15.02■□□□□ -0
COL12A1-205ENST00000425443 UTP14AQ9BVJ6 771 aaKnown RBP15.02■□□□□ -0
COL12A1-205ENST00000425443 PTPN21Q16825 1174 aa15.02□□□□□ -0.01
COL12A1-205ENST00000425443 GRIPAP1Q4V328 841 aa15.02□□□□□ -0.01
COL12A1-205ENST00000425443 MICU3Q86XE3 530 aa15.02□□□□□ -0.01
COL12A1-205ENST00000425443 CCDC82Q8N4S0 544 aa15.02□□□□□ -0.01
COL12A1-205ENST00000425443 WWC3Q9ULE0 1092 aa15.02□□□□□ -0.01
COL12A1-205ENST00000425443 B4E1Z4 1266 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 CTAGE5O15320 804 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 IGHMBP2P38935 993 aaKnown RBP15.01□□□□□ -0.01
COL12A1-205ENST00000425443 ANTXR2P58335 489 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 UBE3CQ15386 1083 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 MAGEB6Q8N7X4 407 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 LINC00301Q8NCQ3 95 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 CCDC112Q8NEF3 446 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 NAPBQ9H115 298 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 CCDC87Q9NVE4 849 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 NUTM2BA6NNL0 878 aaPredicted RBP15.01□□□□□ -0.01
COL12A1-205ENST00000425443 NUTM2EB1AL46 878 aaPredicted RBP15.01□□□□□ -0.01
COL12A1-205ENST00000425443 NPHP1O15259 732 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 SMC2O95347 1197 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 METAP2P50579 478 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL12A1-205ENST00000425443 NUTM2AQ8IVF1 878 aaPredicted RBP15.01□□□□□ -0.01
COL12A1-205ENST00000425443 SPATA5Q8NB90 893 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 PHKBQ93100 1093 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 ANGEL1Q9UNK9 670 aaKnown RBP15.01□□□□□ -0.01
COL12A1-205ENST00000425443 SEC31BQ9NQW1 1179 aa15.01□□□□□ -0.01
COL12A1-205ENST00000425443 ZNF215Q9UL58 517 aaPredicted RBP15.01□□□□□ -0.01
COL12A1-205ENST00000425443 UBE2Q2LH0YL09 131 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 CRKLP46109 303 aaKnown RBP15□□□□□ -0.01
COL12A1-205ENST00000425443 RRP12Q5JTH9 1297 aaKnown RBP15□□□□□ -0.01
COL12A1-205ENST00000425443 ZNF34Q8IZ26 560 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 VGLL2Q8N8G2 317 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 MRPS27Q92552 414 aaKnown RBP15□□□□□ -0.01
COL12A1-205ENST00000425443 ANO10Q9NW15 660 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 RTEL1Q9NZ71 1219 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 NIP7Q9Y221 180 aaKnown RBP eCLIP15□□□□□ -0.01
COL12A1-205ENST00000425443 ITGB4P16144 1822 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 CAVIN2O95810 425 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 HSP90AA4PQ58FG1 418 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 LRRN4CLQ8ND94 238 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 SENP2Q9HC62 589 aa15□□□□□ -0.01
COL12A1-205ENST00000425443 MBD4O95243 580 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 EVCP57679 992 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 CCDC152Q4G0S7 254 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 TBC1D10CQ8IV04 446 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 CEP57L1Q8IYX8 460 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 FBXO18Q8NFZ0 1043 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 ZNF512BQ96KM6 892 aaPredicted RBP14.99□□□□□ -0.01
COL12A1-205ENST00000425443 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
COL12A1-205ENST00000425443 MROH7-TTC4A0A0A0MT08 1334 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms