RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 OFD1O75665 1012 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 KLRK1P26718 216 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 ZNF165P49910 485 aa13.49□□□□□ -0.25
UBR4-207ENST00000425413 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
UBR4-207ENST00000425413 ZBTB43O43298 467 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
UBR4-207ENST00000425413 SLC4A8Q2Y0W8 1093 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.48□□□□□ -0.25
UBR4-207ENST00000425413 DRC7Q8IY82 874 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 SPEF2Q9C093 1822 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 CYP2D7A0A087X1C5 515 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 DNTTIP2Q5QJE6 756 aaKnown RBP13.48□□□□□ -0.25
UBR4-207ENST00000425413 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 AK7Q96M32 723 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
UBR4-207ENST00000425413 UBAP1LF5GYI3 381 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 GNPATO15228 680 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 IGDCC4Q8TDY8 1250 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 SDF4Q9BRK5 362 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 SLC26A6Q9BXS9 759 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 LY9Q9HBG7 655 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 COL4A1P02462 1669 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 ZNF500O60304 480 aaPredicted RBP13.47□□□□□ -0.25
UBR4-207ENST00000425413 DYNLL1P63167 89 aaKnown RBP13.47□□□□□ -0.25
UBR4-207ENST00000425413 C11orf57Q6ZUT1 292 aaPredicted RBP13.47□□□□□ -0.25
UBR4-207ENST00000425413 AMIGO3Q86WK7 504 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 NUP133Q8WUM0 1156 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 SLC12A7Q9Y666 1083 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 AHDC1Q5TGY3 1603 aaPredicted RBP13.47□□□□□ -0.25
UBR4-207ENST00000425413 MYH3P11055 1940 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 PRDM1O75626 825 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
UBR4-207ENST00000425413 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
UBR4-207ENST00000425413 AKNAD1Q5T1N1 836 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
UBR4-207ENST00000425413 ZMYM6O95789 1325 aa13.46□□□□□ -0.25
UBR4-207ENST00000425413 NDUFA8P51970 172 aa13.46□□□□□ -0.25
UBR4-207ENST00000425413 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
UBR4-207ENST00000425413 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
UBR4-207ENST00000425413 FBXL16Q8N461 479 aa13.46□□□□□ -0.25
UBR4-207ENST00000425413 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
UBR4-207ENST00000425413 NACAP1Q9BZK3 213 aa13.46□□□□□ -0.25
UBR4-207ENST00000425413 BIN1O00499 593 aa13.46□□□□□ -0.26
UBR4-207ENST00000425413 RANBP6O60518 1105 aaKnown RBP13.46□□□□□ -0.26
UBR4-207ENST00000425413 TOM1O60784 492 aa13.46□□□□□ -0.26
UBR4-207ENST00000425413 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.26
UBR4-207ENST00000425413 RBM10P98175 930 aaKnown RBP13.46□□□□□ -0.26
UBR4-207ENST00000425413 KRT40Q6A162 431 aa13.46□□□□□ -0.26
UBR4-207ENST00000425413 ISM2Q6H9L7 571 aa13.46□□□□□ -0.26
UBR4-207ENST00000425413 NBPF5PQ86XG9 351 aaPredicted RBP13.46□□□□□ -0.26
UBR4-207ENST00000425413 LINC00301Q8NCQ3 95 aa13.46□□□□□ -0.26
UBR4-207ENST00000425413 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.26
UBR4-207ENST00000425413 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
UBR4-207ENST00000425413 ANKRD36CQ5JPF3 1778 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 SPTLC2O15270 562 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 FAM160A1Q05DH4 1040 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 CPLX2Q6PUV4 134 aaKnown RBP13.45□□□□□ -0.26
UBR4-207ENST00000425413 MRPS27Q92552 414 aaKnown RBP13.45□□□□□ -0.26
UBR4-207ENST00000425413 NRBP1Q9UHY1 535 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 TPM2P07951 284 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 ATP2B1P20020 1258 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 PTGS1P23219 599 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 GUCY1A2P33402 732 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 EVX2Q03828 476 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 RTEL1Q9NZ71 1219 aa13.45□□□□□ -0.26
UBR4-207ENST00000425413 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 FAM217BQ9NTX9 383 aaPredicted RBP13.44□□□□□ -0.26
UBR4-207ENST00000425413 KCNJ14Q9UNX9 436 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 ATRNO75882 1429 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 PHLPP1O60346 1717 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 RBM43Q6ZSC3 357 aaKnown RBP13.44□□□□□ -0.26
UBR4-207ENST00000425413 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 EP400Q96L91 3159 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 ZPR1O75312 459 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 ANO1Q5XXA6 986 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 ENGASEQ8NFI3 743 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 GNL3LQ9NVN8 582 aaKnown RBP13.44□□□□□ -0.26
UBR4-207ENST00000425413 PYCARDQ9ULZ3 195 aa13.44□□□□□ -0.26
UBR4-207ENST00000425413 TAF1P21675 1872 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 TRIM29Q14134 588 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 WTAPQ15007 396 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 FAM84BQ96KN1 310 aaPredicted RBP13.43□□□□□ -0.26
UBR4-207ENST00000425413 KCNF1Q9H3M0 494 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
UBR4-207ENST00000425413 BECN2A8MW95 431 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 GOLGA6L19H0YKK7 550 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 PPARAQ07869 468 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 ALX1Q15699 326 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
UBR4-207ENST00000425413 CLIC6Q96NY7 704 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms