RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 USP17L8P0C7I0 530 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 TEKT1Q969V4 418 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 USP26Q9BXU7 913 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 EPS15P42566 896 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 NBPF9Q3BBW0 867 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 APOBEC3HQ6NTF7 200 aaKnown RBP16.12■□□□□ 0.17
PRPF39-202ENST00000424478 MAPKAPK5Q8IW41 473 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 TGFBRAP1Q8WUH2 860 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 INCENPQ9NQS7 918 aa16.12■□□□□ 0.17
PRPF39-202ENST00000424478 SAP30BPQ9UHR5 308 aaKnown RBP16.12■□□□□ 0.17
PRPF39-202ENST00000424478 NFIAQ12857 509 aa16.11■□□□□ 0.17
PRPF39-202ENST00000424478 TNIP1Q15025 636 aa16.11■□□□□ 0.17
PRPF39-202ENST00000424478 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
PRPF39-202ENST00000424478 RFX7Q2KHR2 1363 aa16.11■□□□□ 0.17
PRPF39-202ENST00000424478 TCP10Q12799 353 aa16.11■□□□□ 0.17
PRPF39-202ENST00000424478 LRRFIP1Q32MZ4 808 aaKnown RBP16.11■□□□□ 0.17
PRPF39-202ENST00000424478 CNOT7Q9UIV1 285 aaKnown RBP16.11■□□□□ 0.17
PRPF39-202ENST00000424478 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 CYP2D6P10635 497 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 RASEFQ8IZ41 740 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 OGFOD1Q8N543 542 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 USP40Q9NVE5 1235 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 RHBDL3P58872 404 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 CDC42EP5Q6NZY7 148 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 ZFPM1Q8IX07 1006 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
PRPF39-202ENST00000424478 REC8O95072 547 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 FGAP02671 866 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 GSTO1P78417 241 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 DLK2Q6UY11 383 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 TEX11Q8IYF3 940 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 TRPM4Q8TD43 1214 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
PRPF39-202ENST00000424478 GPR75-ASB3A0A0A6YYF3 556 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 GAKO14976 1311 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 RAD50Q92878 1312 aa16.09■□□□□ 0.17
PRPF39-202ENST00000424478 CPA1P15085 419 aa16.08■□□□□ 0.17
PRPF39-202ENST00000424478 NKX2-3Q8TAU0 364 aa16.08■□□□□ 0.17
PRPF39-202ENST00000424478 MYOZ2Q9NPC6 264 aa16.08■□□□□ 0.17
PRPF39-202ENST00000424478 USP5P45974 858 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 CDAN1Q8IWY9 1227 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.16
PRPF39-202ENST00000424478 VEZTQ9HBM0 779 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 MINDY4BA8MYZ0 360 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 TDO2P48775 406 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 DLGAP5Q15398 846 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 IFNL3Q8IZI9 196 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 AGBL3Q8NEM8 1001 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
PRPF39-202ENST00000424478 TCP10L2B9ZVM9 353 aa16.07■□□□□ 0.16
PRPF39-202ENST00000424478 LDHCP07864 332 aa16.07■□□□□ 0.16
PRPF39-202ENST00000424478 CTDSPL2Q05D32 466 aa16.07■□□□□ 0.16
PRPF39-202ENST00000424478 GPC2Q8N158 579 aa16.07■□□□□ 0.16
PRPF39-202ENST00000424478 ZDHHC15Q96MV8 337 aa16.07■□□□□ 0.16
PRPF39-202ENST00000424478 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 WNT10BO00744 389 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 BAG3O95817 575 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 FKBP1AP62942 108 aaKnown RBP16.06■□□□□ 0.16
PRPF39-202ENST00000424478 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 SUGT1Q9Y2Z0 365 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 MYO3BQ8WXR4 1341 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 WDHD1O75717 1129 aaPredicted RBP16.06■□□□□ 0.16
PRPF39-202ENST00000424478 CYP21A2P08686 494 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 HHIPL2Q6UWX4 724 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 DCP1AQ9NPI6 582 aaPredicted RBP16.06■□□□□ 0.16
PRPF39-202ENST00000424478 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 GPRC5DQ9NZD1 345 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 HDAC9Q9UKV0 1011 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 PATL2C9JE40 543 aaKnown RBP16.06■□□□□ 0.16
PRPF39-202ENST00000424478 ZBTB22O15209 634 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 PRAMEF18Q5VWM3 479 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 TCEANC2Q96MN5 208 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 CRNKL1Q9BZJ0 848 aaKnown RBP16.06■□□□□ 0.16
PRPF39-202ENST00000424478 NAPBQ9H115 298 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 UPF2Q9HAU5 1272 aaKnown RBP16.06■□□□□ 0.16
PRPF39-202ENST00000424478 TACC3Q9Y6A5 838 aa16.06■□□□□ 0.16
PRPF39-202ENST00000424478 USP17L12C9JPN9 530 aa16.05■□□□□ 0.16
PRPF39-202ENST00000424478 USP17L21D6R901 530 aa16.05■□□□□ 0.16
PRPF39-202ENST00000424478 HIRAP54198 1017 aaPredicted RBP16.05■□□□□ 0.16
PRPF39-202ENST00000424478 FAM163AQ96GL9 167 aaPredicted RBP16.05■□□□□ 0.16
PRPF39-202ENST00000424478 FAM196BA6NMK8 535 aa16.05■□□□□ 0.16
PRPF39-202ENST00000424478 SLC27A2O14975 620 aa16.05■□□□□ 0.16
PRPF39-202ENST00000424478 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
PRPF39-202ENST00000424478 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
PRPF39-202ENST00000424478 NBPF3Q9H094 633 aa16.05■□□□□ 0.16
PRPF39-202ENST00000424478 FLT1P17948 1338 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 PRDM1O75626 825 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 NECTIN1Q15223 517 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 SLF2Q8IX21 1173 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 PPP4CP60510 307 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 KIF4BQ2VIQ3 1234 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 DYNLL2Q96FJ2 89 aa16.04■□□□□ 0.16
PRPF39-202ENST00000424478 PLCD1P51178 756 aa16.03■□□□□ 0.16
PRPF39-202ENST00000424478 CHST3Q7LGC8 479 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms