RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 MPHOSPH8Q99549 860 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 MYD88Q99836 296 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 CD209Q9NNX6 404 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 PRDM5Q9NQX1 630 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-203ENST00000424270 BSDC1Q9NW68 430 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-203ENST00000424270 ALPK3Q96L96 1907 aa8.19□□□□□ -1.1
SDCBP-203ENST00000424270 SHHQ15465 462 aa8.18□□□□□ -1.1
SDCBP-203ENST00000424270 LRRC26Q2I0M4 334 aa8.18□□□□□ -1.1
SDCBP-203ENST00000424270 GADL1Q6ZQY3 521 aa8.18□□□□□ -1.1
SDCBP-203ENST00000424270 GAS2L1Q99501 681 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-203ENST00000424270 TTYH1Q9H313 450 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-203ENST00000424270 TTF2Q9UNY4 1162 aaKnown RBP8.18□□□□□ -1.1
SDCBP-203ENST00000424270 LAS1LQ9Y4W2 734 aaKnown RBP8.18□□□□□ -1.1
SDCBP-203ENST00000424270 ARIH1Q9Y4X5 557 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-203ENST00000424270 AOX1Q06278 1338 aa8.18□□□□□ -1.1
SDCBP-203ENST00000424270 BCRP11274 1271 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 CTSWP56202 376 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 SMAD3P84022 425 aaKnown RBP8.17□□□□□ -1.1
SDCBP-203ENST00000424270 PDE3AQ14432 1141 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 CCDC85BQ15834 202 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-203ENST00000424270 TMEM31Q5JXX7 168 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 TEPSINQ96N21 525 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 ZNF341Q9BYN7 854 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 TSPYL2Q9H2G4 693 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-203ENST00000424270 CWC25Q9NXE8 425 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-203ENST00000424270 DBF4Q9UBU7 674 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-203ENST00000424270 PFASO15067 1338 aa8.17□□□□□ -1.1
SDCBP-203ENST00000424270 DDX60LQ5H9U9 1706 aaKnown RBP8.17□□□□□ -1.1
SDCBP-203ENST00000424270 PCCAP05165 728 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-203ENST00000424270 ATN1P54259 1190 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-203ENST00000424270 CACNB3P54284 484 aa8.16□□□□□ -1.1
SDCBP-203ENST00000424270 NFE2L2Q16236 605 aa8.16□□□□□ -1.1
SDCBP-203ENST00000424270 FASTKD5Q7L8L6 764 aaKnown RBP8.16□□□□□ -1.1
SDCBP-203ENST00000424270 DZIP1LQ8IYY4 767 aaKnown RBP8.16□□□□□ -1.1
SDCBP-203ENST00000424270 ANKRD13CQ8N6S4 541 aa8.16□□□□□ -1.1
SDCBP-203ENST00000424270 P2RX7Q99572 595 aaKnown RBP8.16□□□□□ -1.1
SDCBP-203ENST00000424270 LRFN3Q9BTN0 628 aa8.16□□□□□ -1.1
SDCBP-203ENST00000424270 SENP6Q9GZR1 1112 aaPredicted RBP8.16□□□□□ -1.1
SDCBP-203ENST00000424270 GREM2Q9H772 168 aa8.16□□□□□ -1.1
SDCBP-203ENST00000424270 HYPKQ9NX55 129 aa8.16□□□□□ -1.1
SDCBP-203ENST00000424270 OGDHLQ9ULD0 1010 aa8.16□□□□□ -1.1
SDCBP-203ENST00000424270 TTC28Q96AY4 2481 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 ECM29Q5VYK3 1845 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 COL2A1P02458 1487 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-203ENST00000424270 PRKAR2AP13861 404 aaKnown RBP8.15□□□□□ -1.1
SDCBP-203ENST00000424270 IGFBP4P22692 258 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 INPP5BP32019 993 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 MRE11P49959 708 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 TRIM32Q13049 653 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 TRIM28Q13263 835 aaKnown RBP8.15□□□□□ -1.1
SDCBP-203ENST00000424270 GRIN2CQ14957 1233 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 MFSD14BQ5SR56 506 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 C9orf50Q5SZB4 431 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 CCDC191Q8NCU4 936 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.1
SDCBP-203ENST00000424270 NECAB3Q96P71 396 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-203ENST00000424270 SERPINA10Q9UK55 444 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 ATP11BQ9Y2G3 1177 aa8.15□□□□□ -1.1
SDCBP-203ENST00000424270 CRKP46108 304 aa8.14□□□□□ -1.11
SDCBP-203ENST00000424270 FKBP1AP62942 108 aaKnown RBP8.14□□□□□ -1.11
SDCBP-203ENST00000424270 CCAR1Q8IX12 1150 aaKnown RBP8.14□□□□□ -1.11
SDCBP-203ENST00000424270 PNNQ9H307 717 aaKnown RBP8.14□□□□□ -1.11
SDCBP-203ENST00000424270 CWC22Q9HCG8 908 aaKnown RBP8.14□□□□□ -1.11
SDCBP-203ENST00000424270 PICK1Q9NRD5 415 aa8.14□□□□□ -1.11
SDCBP-203ENST00000424270 SPEF2Q9C093 1822 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 PLIN1O60240 522 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 FRAT2O75474 233 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-203ENST00000424270 TAF5LO75529 589 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 CYP2B6P20813 491 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 CHRNDQ07001 517 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 SKIV2LQ15477 1246 aaKnown RBP8.13□□□□□ -1.11
SDCBP-203ENST00000424270 KRT24Q2M2I5 525 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 MICALL1Q8N3F8 863 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 TTLL11Q8NHH1 800 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 BADQ92934 168 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 UIMC1Q96RL1 719 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 EYSQ5T1H1 3165 aa8.13□□□□□ -1.11
SDCBP-203ENST00000424270 FAM86C2PA6NEL3 165 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 CXCL11O14625 94 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 DDX58O95786 925 aaKnown RBP8.12□□□□□ -1.11
SDCBP-203ENST00000424270 PRR29P0C7W0 189 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 COL6A1P12109 1028 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 ZKSCAN1P17029 563 aaPredicted RBP8.12□□□□□ -1.11
SDCBP-203ENST00000424270 ITGA6P23229 1130 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 DNAJB2P25686 324 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 RTP1P59025 263 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 AAK1Q2M2I8 961 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 GPAT2Q6NUI2 795 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 POTEEQ6S8J3 1075 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 CCDC129Q6ZRS4 1044 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 ZNF576Q9H609 170 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 EPHX3Q9H6B9 360 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 PNMA3Q9UL41 463 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 CHMP3Q9Y3E7 222 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 ZHX2Q9Y6X8 837 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 MGAMO43451 1857 aa8.12□□□□□ -1.11
SDCBP-203ENST00000424270 SNAP23O00161 211 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 IL1R1P14778 569 aa8.11□□□□□ -1.11
SDCBP-203ENST00000424270 CNGA1P29973 690 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms