RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
ACTN4-203ENST00000424234 GAKO14976 1311 aa16.82■□□□□ 0.28
ACTN4-203ENST00000424234 A0A0D9SFI3 127 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 UBE3CQ15386 1083 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 SKOR2Q2VWA4 1001 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-203ENST00000424234 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
ACTN4-203ENST00000424234 SHTN1A0MZ66 631 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 HIP1O00291 1037 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-203ENST00000424234 NMIQ13287 307 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-203ENST00000424234 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 TMED8Q6PL24 325 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-203ENST00000424234 APPBP2Q92624 585 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 DAGLAQ9Y4D2 1042 aa16.81■□□□□ 0.28
ACTN4-203ENST00000424234 USP17L8P0C7I0 530 aa16.8■□□□□ 0.28
ACTN4-203ENST00000424234 CYP7A1P22680 504 aa16.8■□□□□ 0.28
ACTN4-203ENST00000424234 GSTO1P78417 241 aa16.8■□□□□ 0.28
ACTN4-203ENST00000424234 MICALL2Q8IY33 904 aa16.8■□□□□ 0.28
ACTN4-203ENST00000424234 DPF2Q92785 391 aa16.8■□□□□ 0.28
ACTN4-203ENST00000424234 IL25Q9H293 177 aa16.8■□□□□ 0.28
ACTN4-203ENST00000424234 ANO2Q9NQ90 1003 aa16.8■□□□□ 0.28
ACTN4-203ENST00000424234 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
ACTN4-203ENST00000424234 CRKP46108 304 aa16.79■□□□□ 0.28
ACTN4-203ENST00000424234 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
ACTN4-203ENST00000424234 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
ACTN4-203ENST00000424234 OSBP2Q969R2 916 aa16.79■□□□□ 0.28
ACTN4-203ENST00000424234 TEKT1Q969V4 418 aa16.79■□□□□ 0.28
ACTN4-203ENST00000424234 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
ACTN4-203ENST00000424234 SEC62Q99442 399 aaKnown RBP16.79■□□□□ 0.28
ACTN4-203ENST00000424234 GPRC5DQ9NZD1 345 aa16.79■□□□□ 0.28
ACTN4-203ENST00000424234 SERPINA10Q9UK55 444 aa16.79■□□□□ 0.28
ACTN4-203ENST00000424234 GOLGA6L22H0YM25 854 aa16.78■□□□□ 0.28
ACTN4-203ENST00000424234 M0R2C6 588 aa16.78■□□□□ 0.28
ACTN4-203ENST00000424234 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
ACTN4-203ENST00000424234 CWC27Q6UX04 472 aaKnown RBP16.78■□□□□ 0.28
ACTN4-203ENST00000424234 SLF2Q8IX21 1173 aa16.78■□□□□ 0.28
ACTN4-203ENST00000424234 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
ACTN4-203ENST00000424234 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
ACTN4-203ENST00000424234 HDAC9Q9UKV0 1011 aa16.78■□□□□ 0.28
ACTN4-203ENST00000424234 PCDHAC2Q9Y5I4 1007 aa16.78■□□□□ 0.28
ACTN4-203ENST00000424234 RAD50Q92878 1312 aa16.78■□□□□ 0.28
ACTN4-203ENST00000424234 DPY19L2Q6NUT2 758 aa16.77■□□□□ 0.28
ACTN4-203ENST00000424234 ZNF589Q86UQ0 364 aaPredicted RBP16.77■□□□□ 0.28
ACTN4-203ENST00000424234 OGFOD1Q8N543 542 aa16.77■□□□□ 0.28
ACTN4-203ENST00000424234 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
ACTN4-203ENST00000424234 ZDHHC15Q96MV8 337 aa16.77■□□□□ 0.28
ACTN4-203ENST00000424234 MRIQ9BWK5 157 aa16.77■□□□□ 0.28
ACTN4-203ENST00000424234 CNOT7Q9UIV1 285 aaKnown RBP16.77■□□□□ 0.28
ACTN4-203ENST00000424234 LDHCP07864 332 aa16.77■□□□□ 0.27
ACTN4-203ENST00000424234 BTDP43251 543 aa16.77■□□□□ 0.27
ACTN4-203ENST00000424234 NEK4P51957 841 aa16.77■□□□□ 0.27
ACTN4-203ENST00000424234 CFAP100Q494V2 611 aa16.77■□□□□ 0.27
ACTN4-203ENST00000424234 RIOK1Q9BRS2 568 aaKnown RBP16.77■□□□□ 0.27
ACTN4-203ENST00000424234 HELLSQ9NRZ9 838 aa16.77■□□□□ 0.27
ACTN4-203ENST00000424234 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.27
ACTN4-203ENST00000424234 GPR75-ASB3A0A0A6YYF3 556 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 FSD2A1L4K1 749 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 GOLGA6L3A6NEY3 463 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 SGSM2O43147 1006 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 GPAA1O43292 621 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 MBD4O95243 580 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 EGFRP00533 1210 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 MMP14P50281 582 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 CCDC129Q6ZRS4 1044 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 MYOZ2Q9NPC6 264 aa16.76■□□□□ 0.27
ACTN4-203ENST00000424234 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
ACTN4-203ENST00000424234 ATAD5Q96QE3 1844 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 MAGEB6P1A0A0J9YX57 407 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 HSPA4P34932 840 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 EPS15P42566 896 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.272e-6■■■□□ 15
ACTN4-203ENST00000424234 DYNLL1P63167 89 aaKnown RBP16.75■□□□□ 0.27
ACTN4-203ENST00000424234 MCMDC2Q4G0Z9 681 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 APOBEC3HQ6NTF7 200 aaKnown RBP16.75■□□□□ 0.27
ACTN4-203ENST00000424234 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 ZBED3Q96IU2 234 aaPredicted RBP16.75■□□□□ 0.27
ACTN4-203ENST00000424234 CCDC171Q6TFL3 1326 aa16.75■□□□□ 0.27
ACTN4-203ENST00000424234 BAG4O95429 457 aaKnown RBP16.74■□□□□ 0.27
ACTN4-203ENST00000424234 LMOD1P29536 600 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-203ENST00000424234 SAMD7Q7Z3H4 446 aa16.74■□□□□ 0.27
ACTN4-203ENST00000424234 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
ACTN4-203ENST00000424234 AIDAQ96BJ3 306 aa16.74■□□□□ 0.27
ACTN4-203ENST00000424234 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
ACTN4-203ENST00000424234 PALD1Q9ULE6 856 aa16.74■□□□□ 0.27
ACTN4-203ENST00000424234 TRPM7Q96QT4 1865 aa16.73■□□□□ 0.27
ACTN4-203ENST00000424234 H7C1D1 291 aa16.73■□□□□ 0.27
ACTN4-203ENST00000424234 RHBDL3P58872 404 aa16.73■□□□□ 0.27
ACTN4-203ENST00000424234 PPP4CP60510 307 aa16.73■□□□□ 0.27
ACTN4-203ENST00000424234 CUL4AQ13619 759 aa16.73■□□□□ 0.27
ACTN4-203ENST00000424234 DLGAP5Q15398 846 aa16.73■□□□□ 0.27
ACTN4-203ENST00000424234 KIF4BQ2VIQ3 1234 aa16.73■□□□□ 0.27
ACTN4-203ENST00000424234 SH3RF3Q8TEJ3 882 aaPredicted RBP16.73■□□□□ 0.27
ACTN4-203ENST00000424234 NOL10Q9BSC4 688 aaKnown RBP16.73■□□□□ 0.27
ACTN4-203ENST00000424234 BRPF3Q9ULD4 1205 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms