RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ANO2Q9NQ90 1003 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 ARID1BQ8NFD5 2236 aaPredicted RBP4.39□□□□□ -1.71
PMS1-209ENST00000424059 JUNBP17275 347 aaPredicted RBP4.39□□□□□ -1.71
PMS1-209ENST00000424059 DYMQ7RTS9 669 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 ALKBH8Q96BT7 664 aaKnown RBP4.39□□□□□ -1.71
PMS1-209ENST00000424059 DMRTB1Q96MA1 342 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 C1orf115Q9H7X2 142 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 KRT82Q9NSB4 513 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 AP4E1Q9UPM8 1137 aa4.39□□□□□ -1.71
PMS1-209ENST00000424059 CTSBP07858 339 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 RAB6AP20340 208 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ADMP35318 185 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ASPAP45381 313 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ARHGAP4P98171 946 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ECM1Q16610 540 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 AKAP4Q5JQC9 854 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 MISP3Q96FF7 219 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ATXN3LQ9H3M9 355 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 SEMA6CQ9H3T2 930 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 TMEM238LA0A1B0GVL6 79 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 LOC105371045A0A1W2PR82 267 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 AOC2O75106 756 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 NFICP08651 508 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ITGB5P18084 799 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 CYP27C1Q4G0S4 372 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 SEZ6L2Q6UXD5 910 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 TXNDC2Q86VQ3 553 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 FLCNQ8NFG4 579 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ASIC4Q96FT7 647 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 WDR18Q9BV38 432 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 ABCB6Q9NP58 842 aa4.38□□□□□ -1.71
PMS1-209ENST00000424059 FAM170BA6NMN3 283 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 RBAK-RBAKDNI3L0D1 243 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 XRCC5P13010 732 aaKnown RBP4.37□□□□□ -1.71
PMS1-209ENST00000424059 PDE3AQ14432 1141 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 USPL1Q5W0Q7 1092 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 OGFOD3Q6PK18 319 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 CCDC74AQ96AQ1 378 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 RBCK1Q9BYM8 510 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 NPHS2Q9NP85 383 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 FAM105AQ9NUU6 356 aa4.37□□□□□ -1.71
PMS1-209ENST00000424059 SERPINB4P48594 390 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 KRTAP1-1Q07627 177 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 KIF4BQ2VIQ3 1234 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 NFXL1Q6ZNB6 911 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 TP53INP2Q8IXH6 220 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 PPP4R2Q9NY27 417 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 EIF1AYO14602 144 aaKnown RBP4.36□□□□□ -1.71
PMS1-209ENST00000424059 TMPRSS2O15393 492 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 GADD45BO75293 160 aaPredicted RBP4.36□□□□□ -1.71
PMS1-209ENST00000424059 SLFN14P0C7P3 912 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 ID3Q02535 119 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 PPP2R3AQ06190 1150 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 CCER1Q8TC90 406 aaPredicted RBP4.36□□□□□ -1.71
PMS1-209ENST00000424059 CSRNP1Q96S65 589 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 MKNK2Q9HBH9 465 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 C1GALT1Q9NS00 363 aa4.36□□□□□ -1.71
PMS1-209ENST00000424059 ZC3H7BQ9UGR2 993 aaKnown RBP4.36□□□□□ -1.71
PMS1-209ENST00000424059 IGHA2P01877 340 aa4.35□□□□□ -1.71
PMS1-209ENST00000424059 ORC1Q13415 861 aa4.35□□□□□ -1.71
PMS1-209ENST00000424059 SHISA5Q8N114 240 aa4.35□□□□□ -1.71
PMS1-209ENST00000424059 PIDD1Q9HB75 910 aa4.35□□□□□ -1.71
PMS1-209ENST00000424059 PAK6Q9NQU5 681 aaPredicted RBP4.35□□□□□ -1.71
PMS1-209ENST00000424059 CRIM1Q9NZV1 1036 aa4.35□□□□□ -1.71
PMS1-209ENST00000424059 SLC5A6Q9Y289 635 aa4.35□□□□□ -1.71
PMS1-209ENST00000424059 TRIM26Q12899 539 aaPredicted RBP4.34□□□□□ -1.71
PMS1-209ENST00000424059 ZNF765Q7L2R6 523 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 CARNS1A5YM72 827 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 BIN1O00499 593 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 GPR182O15218 404 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 GSTP1P09211 210 aaKnown RBP4.34□□□□□ -1.71
PMS1-209ENST00000424059 POU5F2Q8N7G0 328 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 EMILIN2Q9BXX0 1053 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 CHMP4AQ9BY43 222 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 LRRC4CQ9HCJ2 640 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 PPP1R9AQ9ULJ8 1098 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 DAGLAQ9Y4D2 1042 aa4.34□□□□□ -1.71
PMS1-209ENST00000424059 GRM2Q14416 872 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 GLIS3Q8NEA6 775 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 TMC1Q8TDI8 760 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 BCL7CQ8WUZ0 217 aaPredicted RBP4.33□□□□□ -1.72
PMS1-209ENST00000424059 NIF3L1Q9GZT8 377 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 CCDC86Q9H6F5 360 aaKnown RBP4.33□□□□□ -1.72
PMS1-209ENST00000424059 TMEM39AQ9NV64 488 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 ECEL1O95672 775 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 NETO1Q8TDF5 533 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 FANCD2OSQ96PS1 177 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 NLRP2Q9NX02 1062 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 PCOLCE2Q9UKZ9 415 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 PCDHGC5Q9Y5F6 944 aa4.33□□□□□ -1.72
PMS1-209ENST00000424059 ZNF862O60290 1169 aa4.32□□□□□ -1.72
PMS1-209ENST00000424059 LIG1P18858 919 aa4.32□□□□□ -1.72
PMS1-209ENST00000424059 FAAP100Q0VG06 881 aa4.32□□□□□ -1.72
PMS1-209ENST00000424059 SCARA3Q6AZY7 606 aa4.32□□□□□ -1.72
PMS1-209ENST00000424059 DTHD1Q6ZMT9 781 aa4.32□□□□□ -1.72
PMS1-209ENST00000424059 SMYD4Q8IYR2 804 aaPredicted RBP4.32□□□□□ -1.72
PMS1-209ENST00000424059 VAV3Q9UKW4 847 aa4.32□□□□□ -1.72
PMS1-209ENST00000424059 SOWAHDA6NJG2 315 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 PRKCQQ04759 706 aa4.31□□□□□ -1.72
PMS1-209ENST00000424059 ANKRD24Q8TF21 1146 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms