RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.09■□□□□ 0.65
SPC24-201ENST00000423327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.09■□□□□ 0.65
SPC24-201ENST00000423327 DBNDD2Q9BQY9 259 aa19.09■□□□□ 0.65
SPC24-201ENST00000423327 TLR7Q9NYK1 1049 aaKnown RBP19.09■□□□□ 0.65
SPC24-201ENST00000423327 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.09■□□□□ 0.65
SPC24-201ENST00000423327 MYO5AQ9Y4I1 1855 aaKnown RBP19.09■□□□□ 0.65
SPC24-201ENST00000423327 UNCXA6NJT0 531 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 CAPN15O75808 1086 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 C20orf194Q5TEA3 1177 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 REM2Q8IYK8 340 aaPredicted RBP19.08■□□□□ 0.64
SPC24-201ENST00000423327 ANKRD13AQ8IZ07 590 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 SPATA5Q8NB90 893 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 SLC10A4Q96EP9 437 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 TMOD2Q9NZR1 351 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 FAM198AQ9UFP1 575 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 ABCF2Q9UG63 623 aa19.08■□□□□ 0.64
SPC24-201ENST00000423327 MAST2Q6P0Q8 1798 aa19.07■□□□□ 0.64
SPC24-201ENST00000423327 TBC1D9Q6ZT07 1266 aa19.07■□□□□ 0.64
SPC24-201ENST00000423327 ZGPATQ8N5A5 531 aaKnown RBP19.07■□□□□ 0.64
SPC24-201ENST00000423327 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
SPC24-201ENST00000423327 DBNLQ9UJU6 430 aaKnown RBP19.07■□□□□ 0.64
SPC24-201ENST00000423327 DOCK2Q92608 1830 aa19.07■□□□□ 0.64
SPC24-201ENST00000423327 ZBTB48P10074 688 aaPredicted RBP19.06■□□□□ 0.64
SPC24-201ENST00000423327 MECOMQ03112 1051 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
SPC24-201ENST00000423327 VGLL4Q14135 290 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 DZIP1Q86YF9 867 aaKnown RBP19.06■□□□□ 0.64
SPC24-201ENST00000423327 ZFPM1Q8IX07 1006 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 SIRT2Q8IXJ6 389 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 FAM151AQ8WW52 585 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 EAF2Q96CJ1 260 aaPredicted RBP19.06■□□□□ 0.64
SPC24-201ENST00000423327 FAM163AQ96GL9 167 aaPredicted RBP19.06■□□□□ 0.64
SPC24-201ENST00000423327 R3HDMLQ9H3Y0 253 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 ELP3Q9H9T3 547 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 ZBTB40Q9NUA8 1239 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 EXOC6BQ9Y2D4 811 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 ATRNL1Q5VV63 1379 aa19.06■□□□□ 0.64
SPC24-201ENST00000423327 MROH7-TTC4A0A0A0MT08 1334 aa19.05■□□□□ 0.64
SPC24-201ENST00000423327 TCP10Q12799 353 aa19.05■□□□□ 0.64
SPC24-201ENST00000423327 GORABQ5T7V8 394 aa19.05■□□□□ 0.64
SPC24-201ENST00000423327 USP40Q9NVE5 1235 aa19.05■□□□□ 0.64
SPC24-201ENST00000423327 DDX19BQ9UMR2 479 aa19.05■□□□□ 0.64
SPC24-201ENST00000423327 AK9Q5TCS8 1911 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 IGF2BP3O00425 579 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPC24-201ENST00000423327 TBC1D8O95759 1140 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 MS4A1P11836 297 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 SREBF2Q12772 1141 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 NSUN4Q96CB9 384 aaKnown RBP19.04■□□□□ 0.64
SPC24-201ENST00000423327 OPTNQ96CV9 577 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 ABHD8Q96I13 439 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 IDI2Q9BXS1 227 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 DDX4Q9NQI0 724 aaKnown RBP19.04■□□□□ 0.64
SPC24-201ENST00000423327 SNRKQ9NRH2 765 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 SNCAIPQ9Y6H5 919 aa19.04■□□□□ 0.64
SPC24-201ENST00000423327 MANSC4A6NHS7 340 aaPredicted RBP19.03■□□□□ 0.64
SPC24-201ENST00000423327 WDHD1O75717 1129 aaPredicted RBP19.03■□□□□ 0.64
SPC24-201ENST00000423327 UQCRFS1P1P0C7P4 283 aa19.03■□□□□ 0.64
SPC24-201ENST00000423327 BTDP43251 543 aa19.03■□□□□ 0.64
SPC24-201ENST00000423327 RHBDL3P58872 404 aa19.03■□□□□ 0.64
SPC24-201ENST00000423327 MAP3K9P80192 1104 aa19.03■□□□□ 0.64
SPC24-201ENST00000423327 SPTY2D1Q68D10 685 aaPredicted RBP19.03■□□□□ 0.64
SPC24-201ENST00000423327 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
SPC24-201ENST00000423327 SH3BP5LQ7L8J4 393 aa19.03■□□□□ 0.64
SPC24-201ENST00000423327 MCOLN1Q9GZU1 580 aa19.03■□□□□ 0.64
SPC24-201ENST00000423327 CCDC8Q9H0W5 538 aaPredicted RBP19.03■□□□□ 0.64
SPC24-201ENST00000423327 GPR75-ASB3A0A0A6YYF3 556 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 RGS3P49796 1198 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 TTC39AQ5SRH9 613 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 MIGA2Q7L4E1 593 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 IFNL1Q8IU54 200 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 MS4A4AQ96JQ5 239 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 ZNF512BQ96KM6 892 aaPredicted RBP19.02■□□□□ 0.64
SPC24-201ENST00000423327 WRNIP1Q96S55 665 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 PTPN18Q99952 460 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 CFHR5Q9BXR6 569 aa19.02■□□□□ 0.64
SPC24-201ENST00000423327 CYP2E1P05181 493 aaPredicted RBP19.01■□□□□ 0.63
SPC24-201ENST00000423327 SLURP2P0DP57 97 aa19.01■□□□□ 0.63
SPC24-201ENST00000423327 ZKSCAN4Q969J2 545 aaPredicted RBP19.01■□□□□ 0.63
SPC24-201ENST00000423327 CDK5RAP2Q96SN8 1893 aa19.01■□□□□ 0.63
SPC24-201ENST00000423327 TESPA1A2RU30 521 aaPredicted RBP19■□□□□ 0.63
SPC24-201ENST00000423327 INPP5BP32019 993 aa19■□□□□ 0.63
SPC24-201ENST00000423327 ZAP70P43403 619 aa19■□□□□ 0.63
SPC24-201ENST00000423327 CCDC158Q5M9N0 1113 aa19■□□□□ 0.63
SPC24-201ENST00000423327 ZNF296Q8WUU4 475 aaPredicted RBP19■□□□□ 0.63
SPC24-201ENST00000423327 ZNF112Q9UJU3 913 aa19■□□□□ 0.63
SPC24-201ENST00000423327 DDTLA6NHG4 134 aaPredicted RBP18.99■□□□□ 0.63
SPC24-201ENST00000423327 SPDYE5A6NIY4 337 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 ENTPD3O75355 529 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 DGKZQ13574 1117 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 PDE3AQ14432 1141 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 DCAF15Q66K64 600 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 ADGRA1Q86SQ6 560 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 SLF2Q8IX21 1173 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 RPAP2Q8IXW5 612 aaPredicted RBP18.99■□□□□ 0.63
SPC24-201ENST00000423327 RHPN1Q8TCX5 695 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 OTUD5Q96G74 571 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 ZNF341Q9BYN7 854 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 IL1RAPL2Q9NP60 686 aa18.99■□□□□ 0.63
SPC24-201ENST00000423327 PIH1D3Q9NQM4 214 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms