RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 TBC1D10CQ8IV04 446 aa10.59□□□□□ -0.71
SNX20-203ENST00000423026 MIGA1Q8NAN2 632 aa10.59□□□□□ -0.71
SNX20-203ENST00000423026 ZSCAN16Q9H4T2 348 aaPredicted RBP10.59□□□□□ -0.71
SNX20-203ENST00000423026 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
SNX20-203ENST00000423026 ANGEL1Q9UNK9 670 aaKnown RBP10.59□□□□□ -0.71
SNX20-203ENST00000423026 GOLGA8BA8MQT2 603 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 B4E1Z4 1266 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 CPLX1O14810 134 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 ANTXR2P58335 489 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 AKNAD1Q5T1N1 836 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 SPTY2D1Q68D10 685 aaPredicted RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 ANP32BQ92688 251 aaKnown RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 RBM17Q96I25 401 aaKnown RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 RNF41Q9H4P4 317 aaPredicted RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 NCOA5Q9HCD5 579 aaKnown RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 EPB41L4AQ9HCS5 686 aaPredicted RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 TNRC6CQ9HCJ0 1690 aaKnown RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 XDHP47989 1333 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 ZBTB22O15209 634 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 PRKAB2O43741 272 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 IGSF3O75054 1194 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 GADD45BO75293 160 aaPredicted RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 CTDNEP1O95476 244 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 MTERF4Q7Z6M4 381 aaKnown RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 SCAND2PQ9GZW5 306 aaPredicted RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
SNX20-203ENST00000423026 NSFL1CQ9UNZ2 370 aaKnown RBP10.58□□□□□ -0.72
SNX20-203ENST00000423026 KLRK1P26718 216 aa10.57□□□□□ -0.72
SNX20-203ENST00000423026 CTDSPL2Q05D32 466 aa10.57□□□□□ -0.72
SNX20-203ENST00000423026 CHAF1AQ13111 956 aaPredicted RBP10.57□□□□□ -0.72
SNX20-203ENST00000423026 SART3Q15020 963 aaKnown RBP10.57□□□□□ -0.72
SNX20-203ENST00000423026 CPLX2Q6PUV4 134 aaKnown RBP10.57□□□□□ -0.72
SNX20-203ENST00000423026 CYB5R4Q7L1T6 521 aa10.57□□□□□ -0.72
SNX20-203ENST00000423026 GAS2L3Q86XJ1 694 aa10.57□□□□□ -0.72
SNX20-203ENST00000423026 CCDC88AQ3V6T2 1871 aa10.57□□□□□ -0.72
SNX20-203ENST00000423026 COL1A1P02452 1464 aaPredicted RBP10.57□□□□□ -0.72
SNX20-203ENST00000423026 SH2B2O14492 632 aaPredicted RBP10.56□□□□□ -0.72
SNX20-203ENST00000423026 PLSCR1O15162 318 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 CRY2Q49AN0 593 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 POTEAQ6S8J7 498 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 NFXL1Q6ZNB6 911 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 TOMM22Q9NS69 142 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 ERICH2A1L162 156 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 IFIT3O14879 490 aaKnown RBP10.56□□□□□ -0.72
SNX20-203ENST00000423026 BBOX1O75936 387 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 CDKL5O76039 1030 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 LETM1O95202 739 aaPredicted RBP10.56□□□□□ -0.72
SNX20-203ENST00000423026 APBA3O96018 575 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 PDE4CQ08493 712 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 TMEM67Q5HYA8 995 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 SYNE3Q6ZMZ3 975 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 ZNF804AQ7Z570 1209 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 WDR66Q8TBY9 1149 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 NSUN4Q96CB9 384 aaKnown RBP10.56□□□□□ -0.72
SNX20-203ENST00000423026 RIOK1Q9BRS2 568 aaKnown RBP10.56□□□□□ -0.72
SNX20-203ENST00000423026 CFAP45Q9UL16 551 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 CACNA1SQ13698 1873 aa10.56□□□□□ -0.72
SNX20-203ENST00000423026 ELP1O95163 1332 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 NEDD4P46934 1319 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 SALL1Q9NSC2 1324 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 GOLGA6L4A6NEF3 574 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 MINDY4BA8MYZ0 360 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 KDM4AO75164 1064 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 ATP2B4P23634 1241 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 MSNP26038 577 aaKnown RBP10.55□□□□□ -0.72
SNX20-203ENST00000423026 LIFRP42702 1097 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 METAP2P50579 478 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNX20-203ENST00000423026 PPARAQ07869 468 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 RESTQ13127 1097 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 RRP12Q5JTH9 1297 aaKnown RBP10.55□□□□□ -0.72
SNX20-203ENST00000423026 GIMAP6Q6P9H5 292 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 LRSAM1Q6UWE0 723 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 ADGRA1Q86SQ6 560 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 PROM2Q8N271 834 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 NLGN1Q8N2Q7 840 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 FLAD1Q8NFF5 587 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 IGDCC4Q8TDY8 1250 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 SDR42E1Q8WUS8 393 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 SPATA32Q96LK8 384 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 MTA3Q9BTC8 594 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 BRIP1Q9BX63 1249 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 ZSWIM5Q9P217 1185 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 TIAM2Q8IVF5 1701 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 SYCE3A1L190 88 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 CCDC69A6NI79 296 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
SNX20-203ENST00000423026 ZBTB43O43298 467 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
SNX20-203ENST00000423026 MECOMQ03112 1051 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 CCDC183Q5T5S1 534 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 C15orf52Q6ZUT6 534 aaKnown RBP10.55□□□□□ -0.72
SNX20-203ENST00000423026 SGMS1Q86VZ5 419 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 DZIP1Q86YF9 867 aaKnown RBP10.55□□□□□ -0.72
SNX20-203ENST00000423026 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 CRNKL1Q9BZJ0 848 aaKnown RBP10.55□□□□□ -0.72
SNX20-203ENST00000423026 ORC3Q9UBD5 711 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms