RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 SGIP1Q9BQI5 828 aa21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 RAI14Q9P0K7 980 aa21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 RBM8AQ9Y5S9 174 aaKnown RBP21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 C21orf2O43822 256 aa21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 UBE3CQ15386 1083 aa21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 TTLL6Q8N841 843 aa21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 ZNF830Q96NB3 372 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 DNTTIP2Q5QJE6 756 aaKnown RBP21.4■■□□□ 1.02
PPFIA3-202ENST00000421230 ZC3H12CQ9C0D7 883 aaKnown RBP21.4■■□□□ 1.02
PPFIA3-202ENST00000421230 ZSCAN22P10073 491 aaPredicted RBP21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 PTGER2P43116 358 aa21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 UBE2HP62256 183 aa21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 RASEFQ8IZ41 740 aa21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 ZNF710Q8N1W2 664 aa21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 CNPY2Q9Y2B0 182 aa21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 PDS5AQ29RF7 1337 aaKnown RBP21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 TTC14Q96N46 770 aa21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 TTC12Q9H892 705 aaPredicted RBP21.39■■□□□ 1.01
PPFIA3-202ENST00000421230 GPAA1O43292 621 aa21.38■■□□□ 1.01
PPFIA3-202ENST00000421230 KDM4AO75164 1064 aa21.38■■□□□ 1.01
PPFIA3-202ENST00000421230 IL1R1P14778 569 aa21.38■■□□□ 1.01
PPFIA3-202ENST00000421230 NECTIN1Q15223 517 aa21.38■■□□□ 1.01
PPFIA3-202ENST00000421230 DOK7Q18PE1 504 aa21.38■■□□□ 1.01
PPFIA3-202ENST00000421230 PRDX5P30044 214 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 FUCA2Q9BTY2 467 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 SNX14Q9Y5W7 946 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 SRCAPQ6ZRS2 3230 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 HSPD1P10809 573 aaKnown RBP21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 TGFB2P61812 414 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 ADGRA1Q86SQ6 560 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 ZNF384Q8TF68 577 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 KIAA1551Q9HCM1 1747 aa21.37■■□□□ 1.01
PPFIA3-202ENST00000421230 CHD4Q14839 1912 aa21.36■■□□□ 1.01
PPFIA3-202ENST00000421230 CYP7A1P22680 504 aa21.36■■□□□ 1.01
PPFIA3-202ENST00000421230 CREB3L3Q68CJ9 461 aa21.36■■□□□ 1.01
PPFIA3-202ENST00000421230 MIGA1Q8NAN2 632 aa21.36■■□□□ 1.01
PPFIA3-202ENST00000421230 GRIK5Q16478 980 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 WDR66Q8TBY9 1149 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 EYA3Q99504 573 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 TAF6LQ9Y6J9 622 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 SLC27A2O14975 620 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 ZBTB22O15209 634 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 FOXP2O15409 715 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 STX6O43752 255 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 MECOMQ03112 1051 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 AIDAQ96BJ3 306 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 COA1Q9GZY4 146 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 PIM2Q9P1W9 311 aa21.35■■□□□ 1.01
PPFIA3-202ENST00000421230 SNED1Q8TER0 1413 aa21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 MBD4O95243 580 aa21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 SYT1P21579 422 aa21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 NAA16Q6N069 864 aaPredicted RBP21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 C17orf53Q8N3J3 647 aaPredicted RBP21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 NSUN4Q96CB9 384 aaKnown RBP21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 ARID3AQ99856 593 aa21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 DSCC1Q9BVC3 393 aa21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 ARMT1Q9H993 441 aa21.34■■□□□ 1.01
PPFIA3-202ENST00000421230 G3V3G9 751 aa21.33■■□□□ 1.01
PPFIA3-202ENST00000421230 F13A1P00488 732 aa21.33■■□□□ 1.01
PPFIA3-202ENST00000421230 DCAF8Q5TAQ9 597 aa21.33■■□□□ 1.01
PPFIA3-202ENST00000421230 RTFDC1Q9BY42 306 aaPredicted RBP21.33■■□□□ 1.01
PPFIA3-202ENST00000421230 DBNDD1Q9H9R9 158 aa21.33■■□□□ 1.01
PPFIA3-202ENST00000421230 U3KPZ7 1027 aaPredicted RBP21.33■■□□□ 1.01
PPFIA3-202ENST00000421230 TCHHQ07283 1943 aa21.33■■□□□ 1.01
PPFIA3-202ENST00000421230 SALL1Q9NSC2 1324 aa21.33■■□□□ 1
PPFIA3-202ENST00000421230 GTF2IP78347 998 aa21.33■■□□□ 1
PPFIA3-202ENST00000421230 CC2D2BQ6DHV5 1058 aa21.33■■□□□ 1
PPFIA3-202ENST00000421230 RUFY3Q7L099 469 aa21.33■■□□□ 1
PPFIA3-202ENST00000421230 TSC1Q92574 1164 aa21.33■■□□□ 1
PPFIA3-202ENST00000421230 FBXW7Q969H0 707 aa21.33■■□□□ 1
PPFIA3-202ENST00000421230 STRBPQ96SI9 672 aaKnown RBP21.33■■□□□ 1
PPFIA3-202ENST00000421230 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1
PPFIA3-202ENST00000421230 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.33■■□□□ 1
PPFIA3-202ENST00000421230 AK2P54819 239 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 UTP14CQ5TAP6 766 aaKnown RBP21.32■■□□□ 1
PPFIA3-202ENST00000421230 KCNB2Q92953 911 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 ATP6V1DQ9Y5K8 247 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 LDHBP07195 334 aaKnown RBP21.32■■□□□ 1
PPFIA3-202ENST00000421230 AOC3Q16853 763 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 ADCK5Q3MIX3 580 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 CCDC93Q567U6 631 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 TTLL5Q6EMB2 1281 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 LCORLQ8N3X6 602 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 KIF3AQ9Y496 699 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 CD2APQ9Y5K6 639 aa21.32■■□□□ 1
PPFIA3-202ENST00000421230 ZKSCAN1P17029 563 aaPredicted RBP21.31■■□□□ 1
PPFIA3-202ENST00000421230 SPTY2D1Q68D10 685 aaPredicted RBP21.31■■□□□ 1
PPFIA3-202ENST00000421230 DZIP1Q86YF9 867 aaKnown RBP21.31■■□□□ 1
PPFIA3-202ENST00000421230 KCNQ5Q9NR82 932 aa21.31■■□□□ 1
PPFIA3-202ENST00000421230 CCDC88AQ3V6T2 1871 aa21.31■■□□□ 1
PPFIA3-202ENST00000421230 MFSD14BQ5SR56 506 aa21.31■■□□□ 1
PPFIA3-202ENST00000421230 KIAA1524Q8TCG1 905 aa21.31■■□□□ 1
PPFIA3-202ENST00000421230 UTRNP46939 3433 aa21.3■■□□□ 1
PPFIA3-202ENST00000421230 APPP05067 770 aa21.3■■□□□ 1
PPFIA3-202ENST00000421230 CYP21A2P08686 494 aa21.3■■□□□ 1
PPFIA3-202ENST00000421230 DMTNQ08495 405 aa21.3■■□□□ 1
PPFIA3-202ENST00000421230 DALRD3Q5D0E6 543 aaKnown RBP21.3■■□□□ 1
PPFIA3-202ENST00000421230 RNF20Q5VTR2 975 aa21.3■■□□□ 1
PPFIA3-202ENST00000421230 AP5Z1O43299 807 aa21.29■■□□□ 1
PPFIA3-202ENST00000421230 PRKAB2O43741 272 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms