RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 FTSJ3Q8IY81 847 aaKnown RBP26.38■■□□□ 1.81
PTPN4-202ENST00000420482 DAGLAQ9Y4D2 1042 aa26.38■■□□□ 1.81
PTPN4-202ENST00000420482 PDS5AQ29RF7 1337 aaKnown RBP26.38■■□□□ 1.81
PTPN4-202ENST00000420482 GTF2A2P52657 109 aa26.37■■□□□ 1.81
PTPN4-202ENST00000420482 TIMM10P62072 90 aa26.37■■□□□ 1.81
PTPN4-202ENST00000420482 TFCP2Q12800 502 aa26.37■■□□□ 1.81
PTPN4-202ENST00000420482 G3BP1Q13283 466 aaKnown RBP eCLIP26.37■■□□□ 1.81
PTPN4-202ENST00000420482 VGLL4Q14135 290 aa26.37■■□□□ 1.81
PTPN4-202ENST00000420482 GORABQ5T7V8 394 aa26.37■■□□□ 1.81
PTPN4-202ENST00000420482 CDAN1Q8IWY9 1227 aa26.37■■□□□ 1.81
PTPN4-202ENST00000420482 DIXDC1Q155Q3 683 aa26.36■■□□□ 1.81
PTPN4-202ENST00000420482 DZIP1Q86YF9 867 aaKnown RBP26.36■■□□□ 1.81
PTPN4-202ENST00000420482 FAM151AQ8WW52 585 aa26.36■■□□□ 1.81
PTPN4-202ENST00000420482 NEUROD6Q96NK8 337 aa26.36■■□□□ 1.81
PTPN4-202ENST00000420482 TESPA1A2RU30 521 aaPredicted RBP26.35■■□□□ 1.81
PTPN4-202ENST00000420482 IGF2BP3O00425 579 aaKnown RBP eCLIP26.35■■□□□ 1.81
PTPN4-202ENST00000420482 WDHD1O75717 1129 aaPredicted RBP26.35■■□□□ 1.81
PTPN4-202ENST00000420482 ADORA1P30542 326 aa26.35■■□□□ 1.81
PTPN4-202ENST00000420482 GJA5P36382 358 aa26.35■■□□□ 1.81
PTPN4-202ENST00000420482 XAGE2Q96GT9 111 aa26.35■■□□□ 1.81
PTPN4-202ENST00000420482 WRNIP1Q96S55 665 aa26.35■■□□□ 1.81
PTPN4-202ENST00000420482 CDC42EP5Q6NZY7 148 aa26.34■■□□□ 1.81
PTPN4-202ENST00000420482 TMEM57Q8N5G2 664 aa26.34■■□□□ 1.81
PTPN4-202ENST00000420482 ZNF341Q9BYN7 854 aa26.34■■□□□ 1.81
PTPN4-202ENST00000420482 USP40Q9NVE5 1235 aa26.34■■□□□ 1.81
PTPN4-202ENST00000420482 ABCF2Q9UG63 623 aa26.34■■□□□ 1.81
PTPN4-202ENST00000420482 RASGRF1Q13972 1273 aa26.33■■□□□ 1.81
PTPN4-202ENST00000420482 ERO1BQ86YB8 467 aa26.33■■□□□ 1.81
PTPN4-202ENST00000420482 OTUD5Q96G74 571 aa26.33■■□□□ 1.81
PTPN4-202ENST00000420482 TNNQ9UQP3 1299 aa26.33■■□□□ 1.81
PTPN4-202ENST00000420482 SPDYE5A6NIY4 337 aa26.32■■□□□ 1.8
PTPN4-202ENST00000420482 FBXO46Q6PJ61 603 aaPredicted RBP26.32■■□□□ 1.8
PTPN4-202ENST00000420482 R3HDMLQ9H3Y0 253 aa26.32■■□□□ 1.8
PTPN4-202ENST00000420482 CCL15-CCL14A0A0B4J2E2 113 aa26.31■■□□□ 1.8
PTPN4-202ENST00000420482 TCP10Q12799 353 aa26.31■■□□□ 1.8
PTPN4-202ENST00000420482 CCL15Q16663 113 aa26.31■■□□□ 1.8
PTPN4-202ENST00000420482 ERO1AQ96HE7 468 aa26.31■■□□□ 1.8
PTPN4-202ENST00000420482 MS4A4AQ96JQ5 239 aa26.31■■□□□ 1.8
PTPN4-202ENST00000420482 ZBED9Q6R2W3 1325 aa26.31■■□□□ 1.8
PTPN4-202ENST00000420482 CETPP11597 493 aa26.3■■□□□ 1.8
PTPN4-202ENST00000420482 CRHR2Q13324 411 aa26.3■■□□□ 1.8
PTPN4-202ENST00000420482 ERICH6Q7L0X2 663 aa26.3■■□□□ 1.8
PTPN4-202ENST00000420482 PNMA6EA0A0J9YXQ4 647 aa26.29■■□□□ 1.8
PTPN4-202ENST00000420482 OS9Q13438 667 aaPredicted RBP26.29■■□□□ 1.8
PTPN4-202ENST00000420482 MIGA2Q7L4E1 593 aa26.29■■□□□ 1.8
PTPN4-202ENST00000420482 PTPN18Q99952 460 aa26.29■■□□□ 1.8
PTPN4-202ENST00000420482 SNCAIPQ9Y6H5 919 aa26.29■■□□□ 1.8
PTPN4-202ENST00000420482 RBBP6Q7Z6E9 1792 aaKnown RBP26.28■■□□□ 1.8
PTPN4-202ENST00000420482 SNAPC2Q13487 334 aa26.28■■□□□ 1.8
PTPN4-202ENST00000420482 ARHGEF6Q15052 776 aa26.28■■□□□ 1.8
PTPN4-202ENST00000420482 ITPRIPQ8IWB1 547 aa26.28■■□□□ 1.8
PTPN4-202ENST00000420482 CNKSR2Q8WXI2 1034 aa26.28■■□□□ 1.8
PTPN4-202ENST00000420482 ZKSCAN4Q969J2 545 aaPredicted RBP26.28■■□□□ 1.8
PTPN4-202ENST00000420482 ZFYVE28Q9HCC9 887 aa26.28■■□□□ 1.8
PTPN4-202ENST00000420482 GAKO14976 1311 aa26.28■■□□□ 1.8
PTPN4-202ENST00000420482 ENTPD3O75355 529 aa26.27■■□□□ 1.8
PTPN4-202ENST00000420482 UQCRFS1P1P0C7P4 283 aa26.27■■□□□ 1.8
PTPN4-202ENST00000420482 GSTO1P78417 241 aa26.27■■□□□ 1.8
PTPN4-202ENST00000420482 NFIAQ12857 509 aa26.27■■□□□ 1.8
PTPN4-202ENST00000420482 PPIL2Q13356 520 aa26.27■■□□□ 1.8
PTPN4-202ENST00000420482 TAF1CQ15572 869 aaPredicted RBP26.27■■□□□ 1.8
PTPN4-202ENST00000420482 FAM163AQ96GL9 167 aaPredicted RBP26.27■■□□□ 1.8
PTPN4-202ENST00000420482 IDI2Q9BXS1 227 aa26.27■■□□□ 1.8
PTPN4-202ENST00000420482 LDHCP07864 332 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 SP3Q02447 781 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 PPATQ06203 517 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 SPATA5Q8NB90 893 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 BRI3BPQ8WY22 251 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 ZCCHC17Q9NP64 241 aaKnown RBP26.26■■□□□ 1.79
PTPN4-202ENST00000420482 FAM198AQ9UFP1 575 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 TRIM17Q9Y577 477 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 AK9Q5TCS8 1911 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 MYH2Q9UKX2 1941 aa26.26■■□□□ 1.79
PTPN4-202ENST00000420482 ATP8B2P98198 1209 aa26.25■■□□□ 1.79
PTPN4-202ENST00000420482 ZSCAN29Q8IWY8 852 aaPredicted RBP26.25■■□□□ 1.79
PTPN4-202ENST00000420482 GPR108Q9NPR9 543 aa26.25■■□□□ 1.79
PTPN4-202ENST00000420482 MROH7-TTC4A0A0A0MT08 1334 aa26.24■■□□□ 1.79
PTPN4-202ENST00000420482 MS4A1P11836 297 aa26.24■■□□□ 1.79
PTPN4-202ENST00000420482 ARID4AP29374 1257 aaPredicted RBP26.24■■□□□ 1.79
PTPN4-202ENST00000420482 RGS3P49796 1198 aa26.24■■□□□ 1.79
PTPN4-202ENST00000420482 POLA2Q14181 598 aa26.24■■□□□ 1.79
PTPN4-202ENST00000420482 CCDC158Q5M9N0 1113 aa26.24■■□□□ 1.79
PTPN4-202ENST00000420482 SSH3Q8TE77 659 aa26.24■■□□□ 1.79
PTPN4-202ENST00000420482 HMG20BQ9P0W2 317 aa26.24■■□□□ 1.79
PTPN4-202ENST00000420482 HTTP42858 3142 aa26.23■■□□□ 1.79
PTPN4-202ENST00000420482 IRF6O14896 467 aa26.23■■□□□ 1.79
PTPN4-202ENST00000420482 SURF6O75683 361 aaKnown RBP26.23■■□□□ 1.79
PTPN4-202ENST00000420482 MAP4K4O95819 1239 aaPredicted RBP26.23■■□□□ 1.79
PTPN4-202ENST00000420482 BTDP43251 543 aa26.23■■□□□ 1.79
PTPN4-202ENST00000420482 MECOMQ03112 1051 aa26.23■■□□□ 1.79
PTPN4-202ENST00000420482 PRPF38BQ5VTL8 546 aaKnown RBP26.23■■□□□ 1.79
PTPN4-202ENST00000420482 ZNF112Q9UJU3 913 aa26.23■■□□□ 1.79
PTPN4-202ENST00000420482 INPP5BP32019 993 aa26.22■■□□□ 1.79
PTPN4-202ENST00000420482 OTOP1Q7RTM1 612 aa26.22■■□□□ 1.79
PTPN4-202ENST00000420482 EFCC1Q9HA90 598 aa26.22■■□□□ 1.79
PTPN4-202ENST00000420482 RAI14Q9P0K7 980 aa26.22■■□□□ 1.79
PTPN4-202ENST00000420482 ZBTB7BO15156 539 aaPredicted RBP26.21■■□□□ 1.79
PTPN4-202ENST00000420482 TTC39AQ5SRH9 613 aa26.21■■□□□ 1.79
PTPN4-202ENST00000420482 FAM43AQ8N2R8 423 aa26.21■■□□□ 1.79
PTPN4-202ENST00000420482 CD99L2Q8TCZ2 262 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms