RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 WRNIP1Q96S55 665 aa18.72■□□□□ 0.59
RARA-205ENST00000420042 A0A1B0GUL7 405 aa18.71■□□□□ 0.59
RARA-205ENST00000420042 GTF2A2P52657 109 aa18.71■□□□□ 0.59
RARA-205ENST00000420042 MVPQ14764 893 aaKnown RBP18.71■□□□□ 0.59
RARA-205ENST00000420042 CDC42EP5Q6NZY7 148 aa18.71■□□□□ 0.59
RARA-205ENST00000420042 FAM151AQ8WW52 585 aa18.71■□□□□ 0.59
RARA-205ENST00000420042 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
RARA-205ENST00000420042 ZBTB22O15209 634 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 SOX10P56693 466 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 CRHR2Q13324 411 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 XAGE2Q96GT9 111 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 MS4A4AQ96JQ5 239 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 NEUROD6Q96NK8 337 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 PTPN18Q99952 460 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 USP40Q9NVE5 1235 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 ABCF2Q9UG63 623 aa18.7■□□□□ 0.58
RARA-205ENST00000420042 RPAP1Q9BWH6 1393 aaPredicted RBP18.69■□□□□ 0.58
RARA-205ENST00000420042 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 TCP10Q12799 353 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 G3BP1Q13283 466 aaKnown RBP eCLIP18.69■□□□□ 0.58
RARA-205ENST00000420042 RASGRF1Q13972 1273 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 CCL15Q16663 113 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 GORABQ5T7V8 394 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 FBXO46Q6PJ61 603 aaPredicted RBP18.69■□□□□ 0.58
RARA-205ENST00000420042 MIGA2Q7L4E1 593 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 ERO1BQ86YB8 467 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
RARA-205ENST00000420042 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 ZKSCAN4Q969J2 545 aaPredicted RBP18.69■□□□□ 0.58
RARA-205ENST00000420042 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
RARA-205ENST00000420042 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
RARA-205ENST00000420042 SPTY2D1Q68D10 685 aaPredicted RBP18.68■□□□□ 0.58
RARA-205ENST00000420042 SLF2Q8IX21 1173 aa18.68■□□□□ 0.58
RARA-205ENST00000420042 ERO1AQ96HE7 468 aa18.68■□□□□ 0.58
RARA-205ENST00000420042 SNCAIPQ9Y6H5 919 aa18.68■□□□□ 0.58
RARA-205ENST00000420042 PDS5AQ29RF7 1337 aaKnown RBP18.68■□□□□ 0.58
RARA-205ENST00000420042 MYH13Q9UKX3 1938 aa18.67■□□□□ 0.58
RARA-205ENST00000420042 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
RARA-205ENST00000420042 NFIAQ12857 509 aa18.67■□□□□ 0.58
RARA-205ENST00000420042 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
RARA-205ENST00000420042 BRI3BPQ8WY22 251 aa18.67■□□□□ 0.58
RARA-205ENST00000420042 TRIM17Q9Y577 477 aa18.67■□□□□ 0.58
RARA-205ENST00000420042 OTOFQ9HC10 1997 aa18.66■□□□□ 0.58
RARA-205ENST00000420042 WDHD1O75717 1129 aaPredicted RBP18.66■□□□□ 0.58
RARA-205ENST00000420042 CETPP11597 493 aa18.66■□□□□ 0.58
RARA-205ENST00000420042 TAF1CQ15572 869 aaPredicted RBP18.66■□□□□ 0.58
RARA-205ENST00000420042 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
RARA-205ENST00000420042 SP3Q02447 781 aa18.65■□□□□ 0.58
RARA-205ENST00000420042 SNAPC2Q13487 334 aa18.65■□□□□ 0.58
RARA-205ENST00000420042 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
RARA-205ENST00000420042 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
RARA-205ENST00000420042 FAM198AQ9UFP1 575 aa18.65■□□□□ 0.58
RARA-205ENST00000420042 IRF6O14896 467 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 INPP5BP32019 993 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 PPATQ06203 517 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 PPIL2Q13356 520 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 ITPRIPQ8IWB1 547 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 SPATA5Q8NB90 893 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 CD99L2Q8TCZ2 262 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 IDI2Q9BXS1 227 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.64■□□□□ 0.57
RARA-205ENST00000420042 GAKO14976 1311 aa18.64■□□□□ 0.57
RARA-205ENST00000420042 LAMB1P07942 1786 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 ENTPD3O75355 529 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 BTDP43251 543 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 RGS3P49796 1198 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 OS9Q13438 667 aaPredicted RBP18.63■□□□□ 0.57
RARA-205ENST00000420042 ZSCAN29Q8IWY8 852 aaPredicted RBP18.63■□□□□ 0.57
RARA-205ENST00000420042 ZFPM1Q8IX07 1006 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 FAM163AQ96GL9 167 aaPredicted RBP18.63■□□□□ 0.57
RARA-205ENST00000420042 HMG20BQ9P0W2 317 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 ZNF112Q9UJU3 913 aa18.63■□□□□ 0.57
RARA-205ENST00000420042 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
RARA-205ENST00000420042 MECOMQ03112 1051 aa18.62■□□□□ 0.57
RARA-205ENST00000420042 EFCC1Q9HA90 598 aa18.62■□□□□ 0.57
RARA-205ENST00000420042 MROH7-TTC4A0A0A0MT08 1334 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 LDHCP07864 332 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 UQCRFS1P1P0C7P4 283 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 GSTO1P78417 241 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 PICALMQ13492 652 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 POLA2Q14181 598 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 ARHGEF6Q15052 776 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 C1orf115Q9H7X2 142 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 ZCCHC17Q9NP64 241 aaKnown RBP18.61■□□□□ 0.57
RARA-205ENST00000420042 RAI14Q9P0K7 980 aa18.61■□□□□ 0.57
RARA-205ENST00000420042 ZBED9Q6R2W3 1325 aa18.6■□□□□ 0.57
RARA-205ENST00000420042 BTBD19C9JJ37 291 aa18.6■□□□□ 0.57
RARA-205ENST00000420042 SURF6O75683 361 aaKnown RBP18.6■□□□□ 0.57
RARA-205ENST00000420042 ARID4AP29374 1257 aaPredicted RBP18.6■□□□□ 0.57
RARA-205ENST00000420042 PI16Q6UXB8 463 aa18.6■□□□□ 0.57
RARA-205ENST00000420042 TBC1D9Q6ZT07 1266 aa18.6■□□□□ 0.57
RARA-205ENST00000420042 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
RARA-205ENST00000420042 SSH3Q8TE77 659 aa18.6■□□□□ 0.57
RARA-205ENST00000420042 GPR108Q9NPR9 543 aa18.6■□□□□ 0.57
RARA-205ENST00000420042 PTPN22Q9Y2R2 807 aa18.6■□□□□ 0.57
RARA-205ENST00000420042 GPR75-ASB3A0A0A6YYF3 556 aa18.59■□□□□ 0.57
RARA-205ENST00000420042 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
RARA-205ENST00000420042 TLR2O60603 784 aa18.59■□□□□ 0.57
RARA-205ENST00000420042 CCDC158Q5M9N0 1113 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms