RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 VPS37DQ86XT2 251 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 GPHNQ9NQX3 736 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-204ENST00000419671 ABCF2Q9UG63 623 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 DDX49Q9Y6V7 483 aaKnown RBP9.6□□□□□ -0.87
COL12A1-204ENST00000419671 GSG1L2A8MUP6 293 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 SEMA3EO15041 775 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 PRKAB2O43741 272 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 JAK2O60674 1132 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 PFKFB2O60825 505 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 APBA3O96018 575 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 EVCP57679 992 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 MIGA1Q8NAN2 632 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
COL12A1-204ENST00000419671 PDS5AQ29RF7 1337 aaKnown RBP9.59□□□□□ -0.87
COL12A1-204ENST00000419671 CTDNEP1O95476 244 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 CYP7A1P22680 504 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 HIBADHP31937 336 aaKnown RBP9.59□□□□□ -0.87
COL12A1-204ENST00000419671 ST5P78524 1137 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 LARP1BQ659C4 914 aaKnown RBP9.59□□□□□ -0.87
COL12A1-204ENST00000419671 IFNL3Q8IZI9 196 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 GPT2Q8TD30 523 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 NEDD4P46934 1319 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 WDR19Q8NEZ3 1342 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 QSER1Q2KHR3 1735 aa9.59□□□□□ -0.87
COL12A1-204ENST00000419671 PRC1O43663 620 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 RXRBP28702 533 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 PDIA3P30101 505 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 MCM5P33992 734 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 CYB5R4Q7L1T6 521 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 CDC37L1Q7L3B6 337 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 SMARCC2Q8TAQ2 1214 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 RPGRQ92834 1020 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 ZNF274Q96GC6 653 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 RIOK1Q9BRS2 568 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 INCENPQ9NQS7 918 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 WDR70Q9NW82 654 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 NSFL1CQ9UNZ2 370 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 TACC3Q9Y6A5 838 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 DLEC1Q9Y238 1755 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 FSD2A1L4K1 749 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 VPS37CA5D8V6 355 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 GNAT2P19087 354 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 RALYLQ86SE5 291 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 NSUN7Q8NE18 718 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 LLPHQ9BRT6 129 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 NAPBQ9H115 298 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 NCOA5Q9HCD5 579 aaKnown RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 RAI14Q9P0K7 980 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 ANKIB1Q9P2G1 1089 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 RGS17Q9UGC6 210 aaPredicted RBP9.58□□□□□ -0.88
COL12A1-204ENST00000419671 BRPF3Q9ULD4 1205 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 SLC4A4Q9Y6R1 1079 aa9.58□□□□□ -0.88
COL12A1-204ENST00000419671 XDHP47989 1333 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 SALL1Q9NSC2 1324 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 MYH6P13533 1939 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 KLRG2A4D1S0 409 aaPredicted RBP9.57□□□□□ -0.88
COL12A1-204ENST00000419671 B4E1Z4 1266 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 PDCP20941 246 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 HMGB2P26583 209 aaKnown RBP9.57□□□□□ -0.88
COL12A1-204ENST00000419671 PRDX5P30044 214 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 CCT2P78371 535 aaKnown RBP9.57□□□□□ -0.88
COL12A1-204ENST00000419671 TMEM87AQ8NBN3 555 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 SDR42E1Q8WUS8 393 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 NSUN4Q96CB9 384 aaKnown RBP9.57□□□□□ -0.88
COL12A1-204ENST00000419671 DUOX1Q9NRD9 1551 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 CNPY2Q9Y2B0 182 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 LEMD3Q9Y2U8 911 aa9.57□□□□□ -0.88
COL12A1-204ENST00000419671 FOCADQ5VW36 1801 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 HOXA10P31260 410 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 GPSM2P81274 684 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 MECOMQ03112 1051 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 CTDSPL2Q05D32 466 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 TRDNQ13061 729 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 NAA16Q6N069 864 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 USP48Q86UV5 1035 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 DDX11Q96FC9 970 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 NAV1Q8NEY1 1877 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 PTPDC1A2A3K4 754 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 TDO2P48775 406 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 DYNLL1P63167 89 aaKnown RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 DNM1Q05193 864 aaKnown RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 CHAF1AQ13111 956 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 CAVIN1Q6NZI2 390 aaKnown RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 C15orf52Q6ZUT6 534 aaKnown RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 GAS2L3Q86XJ1 694 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 TDRD7Q8NHU6 1098 aaKnown RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 RBM17Q96I25 401 aaKnown RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 GPR101Q96P66 508 aaPredicted RBP9.56□□□□□ -0.88
COL12A1-204ENST00000419671 ZSWIM5Q9P217 1185 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 JAG2Q9Y219 1238 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 CLEC11AQ9Y240 323 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 ATP6V1DQ9Y5K8 247 aa9.56□□□□□ -0.88
COL12A1-204ENST00000419671 KLF18A0A0U1RQI7 1052 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 GADD45BO75293 160 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-204ENST00000419671 AKNAD1Q5T1N1 836 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms