RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 KRT2P35908 639 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 LUZP1Q86V48 1076 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 BIN1O00499 593 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 PHACTR2O75167 634 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 R3HDM1Q15032 1099 aaKnown RBP9.62□□□□□ -0.87
UBR4-206ENST00000419533 KRT79Q5XKE5 535 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 HOOK3Q86VS8 718 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 ARHGEF10LQ9HCE6 1279 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 GOLGA6L7A0A1B0GV03 622 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
UBR4-206ENST00000419533 RRAGBQ5VZM2 374 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 NECAB1Q8N987 351 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 CPLX3Q8WVH0 158 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 ADGRB1O14514 1584 aa9.62□□□□□ -0.87
UBR4-206ENST00000419533 PHLPP1O60346 1717 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 TRIM75PA6NK02 468 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 CA8P35219 290 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 PTPN14Q15678 1187 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 KRT24Q2M2I5 525 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 UBXN4Q92575 508 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 PPFIA3O75145 1194 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 MBD4O95243 580 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 USPL1Q5W0Q7 1092 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 NIM1KQ8IY84 436 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 TBC1D32Q96NH3 1257 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 PPM1FP49593 454 aaPredicted RBP9.61□□□□□ -0.87
UBR4-206ENST00000419533 FAM193AP78312 1265 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 CCDC91Q7Z6B0 441 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 GSTTP1A0A1W2PQM5 241 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 MACROD2A1Z1Q3 448 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 IFI16Q16666 785 aaKnown RBP9.61□□□□□ -0.87
UBR4-206ENST00000419533 TMC4Q7Z404 712 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 APBB1IPQ7Z5R6 666 aaPredicted RBP9.61□□□□□ -0.87
UBR4-206ENST00000419533 CTAGE1Q96RT6 745 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 IMPG2Q9BZV3 1241 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 TAOK3Q9H2K8 898 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 A0A1B0GUL7 405 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 PSDA5PKW4 1024 aaPredicted RBP9.61□□□□□ -0.87
UBR4-206ENST00000419533 EIF4A1P60842 406 aaKnown RBP9.61□□□□□ -0.87
UBR4-206ENST00000419533 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 JAG2Q9Y219 1238 aa9.61□□□□□ -0.87
UBR4-206ENST00000419533 KIF4AO95239 1232 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 SPAG1Q07617 926 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 MAP9Q49MG5 647 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 DALRD3Q5D0E6 543 aaKnown RBP9.6□□□□□ -0.87
UBR4-206ENST00000419533 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
UBR4-206ENST00000419533 BIN2Q9UBW5 565 aaPredicted RBP9.6□□□□□ -0.87
UBR4-206ENST00000419533 MROH5Q6ZUA9 1318 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 KIAA0754O94854 1291 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 ASIC1P78348 528 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 RAB3GAP1Q15042 981 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 SKAP1Q86WV1 359 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 MRPS27Q92552 414 aaKnown RBP9.6□□□□□ -0.87
UBR4-206ENST00000419533 TCHPQ9BT92 498 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 SYNCQ9H7C4 482 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 CHL1O00533 1208 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 FAM13AO94988 1023 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 CREB3L3Q68CJ9 461 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 CC2D2BQ6DHV5 1058 aa9.6□□□□□ -0.87
UBR4-206ENST00000419533 GOLGA6L9A6NEM1 432 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 PSMA7O14818 248 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 N4BP3O15049 544 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 ZBTB7AO95365 584 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 SERPINB2P05120 415 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 BRDTQ58F21 947 aaPredicted RBP9.59□□□□□ -0.87
UBR4-206ENST00000419533 TNNI3KQ59H18 835 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 IL17REQ8NFR9 667 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 LPIN2Q92539 896 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 NAA15Q9BXJ9 866 aaKnown RBP9.59□□□□□ -0.87
UBR4-206ENST00000419533 SAP30BPQ9UHR5 308 aaKnown RBP9.59□□□□□ -0.87
UBR4-206ENST00000419533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.59□□□□□ -0.879e-9■■□□□ 11.9
UBR4-206ENST00000419533 FPGT-TNNI3KV9GXZ4 949 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 SIGLEC1Q9BZZ2 1709 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 AFMP43652 599 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 TAF3Q5VWG9 929 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 KIF18AQ8NI77 898 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 TCEANC2Q96MN5 208 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 CRACR2AQ9BSW2 395 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 MMRN2Q9H8L6 949 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 TMCO5BA8MYB1 307 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 CYP27B1O15528 508 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 TMC6Q7Z403 805 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 TBC1D22AQ8WUA7 517 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 LRRC45Q96CN5 670 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 XAGE2Q96GT9 111 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 GDPD2Q9HCC8 539 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 SPAG5Q96R06 1193 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 GLT8D2Q9H1C3 349 aa9.59□□□□□ -0.87
UBR4-206ENST00000419533 NOP2P46087 812 aaKnown RBP9.58□□□□□ -0.88
UBR4-206ENST00000419533 ZNF165P49910 485 aa9.58□□□□□ -0.88
UBR4-206ENST00000419533 MARCH10Q8NA82 808 aaPredicted RBP9.58□□□□□ -0.88
UBR4-206ENST00000419533 CCDC102AQ96A19 550 aa9.58□□□□□ -0.88
UBR4-206ENST00000419533 ACTN2P35609 894 aa9.58□□□□□ -0.88
UBR4-206ENST00000419533 GRIPAP1Q4V328 841 aa9.58□□□□□ -0.88
UBR4-206ENST00000419533 EHBP1Q8NDI1 1231 aa9.58□□□□□ -0.88
UBR4-206ENST00000419533 PLVAPQ9BX97 442 aa9.58□□□□□ -0.88
UBR4-206ENST00000419533 ZBTB40Q9NUA8 1239 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms