RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 USP17L3A6NCW0 530 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 USP17L4A6NCW7 530 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 PSMD14O00487 310 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 DACT2Q5SW24 774 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 USP17L1Q7RTZ2 530 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
LINC00642-201ENST00000419459 ZNRF3Q9ULT6 936 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 SALL1Q9NSC2 1324 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 SGSM2O43147 1006 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 SCNN1DP51172 638 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 CXCL9Q07325 125 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 STRIP1Q5VSL9 837 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 MCTP1Q6DN14 999 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 CAVIN1Q6NZI2 390 aaKnown RBP15.26■□□□□ 0.03
LINC00642-201ENST00000419459 SMAP1Q8IYB5 467 aaPredicted RBP15.26■□□□□ 0.03
LINC00642-201ENST00000419459 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
LINC00642-201ENST00000419459 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
LINC00642-201ENST00000419459 TIAM2Q8IVF5 1701 aa15.25■□□□□ 0.03
LINC00642-201ENST00000419459 CYP7A1P22680 504 aa15.25■□□□□ 0.03
LINC00642-201ENST00000419459 ZMYM1Q5SVZ6 1142 aa15.25■□□□□ 0.03
LINC00642-201ENST00000419459 VPS53Q5VIR6 699 aa15.25■□□□□ 0.03
LINC00642-201ENST00000419459 NAA16Q6N069 864 aaPredicted RBP15.25■□□□□ 0.03
LINC00642-201ENST00000419459 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
LINC00642-201ENST00000419459 RFX7Q2KHR2 1363 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 LMNB1P20700 586 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 ZGPATQ8N5A5 531 aaKnown RBP15.24■□□□□ 0.03
LINC00642-201ENST00000419459 TBC1D22AQ8WUA7 517 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 APPBP2Q92624 585 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.24■□□□□ 0.03
LINC00642-201ENST00000419459 TTF2Q9UNY4 1162 aaKnown RBP15.24■□□□□ 0.03
LINC00642-201ENST00000419459 UQCRHLA0A096LP55 91 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 HIP1O00291 1037 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 ST18O60284 1047 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 MBD3O95983 291 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 UQCRHP07919 91 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 MCMDC2Q4G0Z9 681 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 SASS6Q6UVJ0 657 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 LRSAM1Q6UWE0 723 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 RNF181Q9P0P0 153 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
LINC00642-201ENST00000419459 ZNF541Q9H0D2 1346 aa15.23■□□□□ 0.03
LINC00642-201ENST00000419459 ZFYP08048 801 aaPredicted RBP15.23■□□□□ 0.03
LINC00642-201ENST00000419459 PTH1RQ03431 593 aa15.23■□□□□ 0.03
LINC00642-201ENST00000419459 UBE3CQ15386 1083 aa15.23■□□□□ 0.03
LINC00642-201ENST00000419459 ZSCAN25Q6NSZ9 544 aa15.23■□□□□ 0.03
LINC00642-201ENST00000419459 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC00642-201ENST00000419459 GPAA1O43292 621 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 MBD4O95243 580 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 DYNLL1P63167 89 aaKnown RBP15.22■□□□□ 0.03
LINC00642-201ENST00000419459 SPTY2D1Q68D10 685 aaPredicted RBP15.22■□□□□ 0.03
LINC00642-201ENST00000419459 LCORLQ8N3X6 602 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 ARMT1Q9H993 441 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 PRDM4Q9UKN5 801 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 CCDC171Q6TFL3 1326 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 SHTN1A0MZ66 631 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 ZBTB22O15209 634 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 LRRFIP1Q32MZ4 808 aaKnown RBP15.22■□□□□ 0.03
LINC00642-201ENST00000419459 RUFY2Q8WXA3 655 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 AIDAQ96BJ3 306 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 GJA3Q9Y6H8 435 aa15.22■□□□□ 0.03
LINC00642-201ENST00000419459 BAZ2AQ9UIF9 1905 aaKnown RBP15.21■□□□□ 0.03
LINC00642-201ENST00000419459 FZD9O00144 591 aa15.21■□□□□ 0.03
LINC00642-201ENST00000419459 RSBN1LQ6PCB5 846 aaPredicted RBP15.21■□□□□ 0.03
LINC00642-201ENST00000419459 USP26Q9BXU7 913 aa15.21■□□□□ 0.03
LINC00642-201ENST00000419459 HELLSQ9NRZ9 838 aa15.21■□□□□ 0.03
LINC00642-201ENST00000419459 FAM13BQ9NYF5 915 aa15.21■□□□□ 0.03
LINC00642-201ENST00000419459 FOXP2O15409 715 aa15.21■□□□□ 0.02
LINC00642-201ENST00000419459 VIL1P09327 827 aaKnown RBP15.21■□□□□ 0.02
LINC00642-201ENST00000419459 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.02
LINC00642-201ENST00000419459 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.02
LINC00642-201ENST00000419459 CIAPIN1Q6FI81 312 aa15.21■□□□□ 0.02
LINC00642-201ENST00000419459 CDK5RAP2Q96SN8 1893 aa15.2■□□□□ 0.02
LINC00642-201ENST00000419459 PRKAB2O43741 272 aa15.2■□□□□ 0.02
LINC00642-201ENST00000419459 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
LINC00642-201ENST00000419459 RIOK1Q9BRS2 568 aaKnown RBP15.2■□□□□ 0.02
LINC00642-201ENST00000419459 LSG1Q9H089 658 aaKnown RBP15.2■□□□□ 0.02
LINC00642-201ENST00000419459 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
LINC00642-201ENST00000419459 RAD50Q92878 1312 aa15.2■□□□□ 0.02
LINC00642-201ENST00000419459 REC8O95072 547 aa15.19■□□□□ 0.02
LINC00642-201ENST00000419459 RBM10P98175 930 aaKnown RBP15.19■□□□□ 0.02
LINC00642-201ENST00000419459 DAGLAQ9Y4D2 1042 aa15.19■□□□□ 0.02
LINC00642-201ENST00000419459 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
LINC00642-201ENST00000419459 HSPD1P10809 573 aaKnown RBP15.19■□□□□ 0.02
LINC00642-201ENST00000419459 RBM5P52756 815 aaKnown RBP eCLIP15.19■□□□□ 0.02
LINC00642-201ENST00000419459 EIF6P56537 245 aaKnown RBP15.19■□□□□ 0.02
LINC00642-201ENST00000419459 STRBPQ96SI9 672 aaKnown RBP15.19■□□□□ 0.02
LINC00642-201ENST00000419459 BTDP43251 543 aa15.18■□□□□ 0.02
LINC00642-201ENST00000419459 SLC4A8Q2Y0W8 1093 aa15.18■□□□□ 0.02
LINC00642-201ENST00000419459 GPT2Q8TD30 523 aa15.18■□□□□ 0.02
LINC00642-201ENST00000419459 GMLQ99445 158 aa15.18■□□□□ 0.02
LINC00642-201ENST00000419459 EGFRP00533 1210 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 APPP05067 770 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 CRKP46108 304 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
LINC00642-201ENST00000419459 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
LINC00642-201ENST00000419459 DDNO94850 711 aaPredicted RBP15.17■□□□□ 0.02
LINC00642-201ENST00000419459 MCM2P49736 904 aa15.17■□□□□ 0.02
LINC00642-201ENST00000419459 FKBP1AP62942 108 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms