RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 CHMP4AQ9BY43 222 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 PRDM6Q9NQX0 595 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 DDX60LQ5H9U9 1706 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 COL2A1P02458 1487 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-205ENST00000419442 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 PTPRFP10586 1907 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 GCKRQ14397 625 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 C7orf61Q8IZ16 206 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 ANKLE1Q8NAG6 615 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 PARK7Q99497 189 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF1-205ENST00000419442 ELNP15502 786 aa13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 INPP5BP32019 993 aa13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 MAGEA10P43363 369 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 FLT3LGP49771 235 aa13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 DCAF15Q66K64 600 aa13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 FAM109BQ6ICB4 259 aaPredicted RBP13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 ZNF112Q9UJU3 913 aa13.44□□□□□ -0.26
RAPGEF1-205ENST00000419442 GNAI1P63096 354 aa13.43□□□□□ -0.26
RAPGEF1-205ENST00000419442 GRIK5Q16478 980 aa13.43□□□□□ -0.26
RAPGEF1-205ENST00000419442 GPAT2Q6NUI2 795 aa13.43□□□□□ -0.26
RAPGEF1-205ENST00000419442 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
RAPGEF1-205ENST00000419442 CACNA1FO60840 1977 aa13.43□□□□□ -0.26
RAPGEF1-205ENST00000419442 POTEB2H3BUK9 544 aa13.42□□□□□ -0.26
RAPGEF1-205ENST00000419442 CACNB3P54284 484 aa13.42□□□□□ -0.26
RAPGEF1-205ENST00000419442 NOL9Q5SY16 702 aaKnown RBP13.42□□□□□ -0.26
RAPGEF1-205ENST00000419442 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
RAPGEF1-205ENST00000419442 MRIQ9BWK5 157 aa13.42□□□□□ -0.26
RAPGEF1-205ENST00000419442 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
RAPGEF1-205ENST00000419442 CXCL11O14625 94 aa13.41□□□□□ -0.26
RAPGEF1-205ENST00000419442 CYP2C8P10632 490 aa13.41□□□□□ -0.26
RAPGEF1-205ENST00000419442 FOXO4P98177 505 aa13.41□□□□□ -0.26
RAPGEF1-205ENST00000419442 IFIT5Q13325 482 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-205ENST00000419442 FAM84BQ96KN1 310 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-205ENST00000419442 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-205ENST00000419442 SYN1P17600 705 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 UBE4AQ14139 1066 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 RALBP1Q15311 655 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 TSPYL6Q8N831 410 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 TEKT1Q969V4 418 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 NBPF3Q9H094 633 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 PHIPQ8WWQ0 1821 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 AK9Q5TCS8 1911 aa13.4□□□□□ -0.26
RAPGEF1-205ENST00000419442 GYG1P46976 350 aa13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 APOBEC3HQ6NTF7 200 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 G2E3Q7L622 706 aa13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 LINS1Q8NG48 757 aa13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 TMOD2Q9NZR1 351 aa13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 PLXNB2O15031 1838 aa13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
RAPGEF1-205ENST00000419442 TNPO2O14787 897 aaKnown RBP13.38□□□□□ -0.27
RAPGEF1-205ENST00000419442 MIGA2Q7L4E1 593 aa13.38□□□□□ -0.27
RAPGEF1-205ENST00000419442 TBC1D22AQ8WUA7 517 aa13.38□□□□□ -0.27
RAPGEF1-205ENST00000419442 FAM151AQ8WW52 585 aa13.38□□□□□ -0.27
RAPGEF1-205ENST00000419442 A0A0G2JLL6 359 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 LDHAL6AQ6ZMR3 332 aa13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 FASTKD5Q7L8L6 764 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 PRRT2Q7Z6L0 340 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 STK31Q9BXU1 1019 aa13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 C11orf49Q9H6J7 331 aa13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 OGDHLQ9ULD0 1010 aa13.37□□□□□ -0.27
RAPGEF1-205ENST00000419442 DOCK1Q14185 1865 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 PLIN1O60240 522 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 DNAAF4Q8WXU2 420 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 ZNF594Q96JF6 807 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 SUGT1Q9Y2Z0 365 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 MYH13Q9UKX3 1938 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 PFASO15067 1338 aa13.36□□□□□ -0.27
RAPGEF1-205ENST00000419442 SPTBN5Q9NRC6 3674 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 MAST2Q6P0Q8 1798 aa13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 HMGCRP04035 888 aa13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 COA7Q96BR5 231 aa13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 MAST3O60307 1309 aa13.35□□□□□ -0.27
RAPGEF1-205ENST00000419442 ATRNL1Q5VV63 1379 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 COL6A1P12109 1028 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 FLIIQ13045 1269 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 EPHA10Q5JZY3 1008 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 HMX1Q9NP08 348 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 CHMP3Q9Y3E7 222 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 LOC285556D6RIA3 1793 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms