RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 JMYQ8N9B5 988 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 INCENPQ9NQS7 918 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 LDHAL6AQ6ZMR3 332 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 CCDC82Q8N4S0 544 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 ZCRB1Q8TBF4 217 aaKnown RBP17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 CNNM3Q8NE01 707 aa17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 MNS1Q8NEH6 495 aa17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.49■□□□□ 0.395e-7■□□□□ 10.8
SEMA3B-203ENST00000419007 TMEM232C9JQI7 657 aa17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 CDC27P30260 824 aa17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 CNNM1Q9NRU3 951 aa17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 FANCLQ9NW38 375 aa17.49■□□□□ 0.39
SEMA3B-203ENST00000419007 ERICH4A6NGS2 130 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 MCAMP43121 646 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 TOMM22Q9NS69 142 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 CAMTA1Q9Y6Y1 1673 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 ETF1P62495 437 aaKnown RBP17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 UBXN4Q92575 508 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 ZNF446Q9NWS9 450 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 CDKL5O76039 1030 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 LONRF3Q496Y0 759 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 ZMYM6O95789 1325 aa17.48■□□□□ 0.39
SEMA3B-203ENST00000419007 IKBKBO14920 756 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 ZBTB43O43298 467 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 CBFA2T2O43439 604 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 SLC26A6Q9BXS9 759 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 L2HGDHQ9H9P8 463 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 ABCC6O95255 1503 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 FOXN1O15353 648 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 CDK11BP21127 795 aaKnown RBP17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 TCIRG1Q13488 830 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 TERF2Q15554 542 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 CCDC102BQ68D86 513 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 HSD3B7Q9H2F3 369 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 KCND1Q9NSA2 647 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 PCDHA5Q9Y5H7 936 aa17.47■□□□□ 0.39
SEMA3B-203ENST00000419007 TICAM2Q86XR7 235 aa17.46■□□□□ 0.39
SEMA3B-203ENST00000419007 NBPF3Q9H094 633 aa17.46■□□□□ 0.39
SEMA3B-203ENST00000419007 KCNH3Q9ULD8 1083 aa17.46■□□□□ 0.39
SEMA3B-203ENST00000419007 TMEM67Q5HYA8 995 aa17.46■□□□□ 0.39
SEMA3B-203ENST00000419007 RRP12Q5JTH9 1297 aaKnown RBP17.46■□□□□ 0.39
SEMA3B-203ENST00000419007 CLCN6P51797 869 aa17.46■□□□□ 0.39
SEMA3B-203ENST00000419007 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
SEMA3B-203ENST00000419007 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 SH2B2O14492 632 aaPredicted RBP17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 KIF6Q6ZMV9 814 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 CARD6Q9BX69 1037 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 TUBE1Q9UJT0 475 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 CCP110O43303 1012 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 ITGA6P23229 1130 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 BMS1Q14692 1282 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 ZNF827Q17R98 1081 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 HELBQ8NG08 1087 aaPredicted RBP17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 AIDAQ96BJ3 306 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 TIGD1Q96MW7 591 aa17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 PIH1D3Q9NQM4 214 aaKnown RBP17.45■□□□□ 0.38
SEMA3B-203ENST00000419007 ADD2P35612 726 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 PTPAQ15257 358 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 ISCA1Q9BUE6 129 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 GREM2Q9H772 168 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 TRPM3Q9HCF6 1732 aaPredicted RBP17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 CPDO75976 1380 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 IFIT3O14879 490 aaKnown RBP17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 PPP6R2O75170 966 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 DHX8Q14562 1220 aaKnown RBP17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 TRMT44Q8IYL2 757 aaKnown RBP17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 STRN4Q9NRL3 753 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 SLC12A7Q9Y666 1083 aa17.44■□□□□ 0.38
SEMA3B-203ENST00000419007 CTDSPL2Q05D32 466 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 PDE4BQ07343 736 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 KRBA2Q6ZNG9 492 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 ZKSCAN3Q9BRR0 538 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 EPC1Q9H2F5 836 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 HPSEQ9Y251 543 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 PDE4CQ08493 712 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 RESP18Q5W5W9 173 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 VSTM4Q8IW00 320 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 CMTR1Q8N1G2 835 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 WWC3Q9ULE0 1092 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 RANBP6O60518 1105 aaKnown RBP17.43■□□□□ 0.38
SEMA3B-203ENST00000419007 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms