RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SPATA5Q8NB90 893 aa20.28■□□□□ 0.84
LINC00404-201ENST00000418660 HOOK2Q96ED9 719 aa20.28■□□□□ 0.84
LINC00404-201ENST00000418660 WNK4Q96J92 1243 aa20.28■□□□□ 0.84
LINC00404-201ENST00000418660 DDX19BQ9UMR2 479 aa20.28■□□□□ 0.84
LINC00404-201ENST00000418660 DZIP1Q86YF9 867 aaKnown RBP20.27■□□□□ 0.84
LINC00404-201ENST00000418660 FAM151AQ8WW52 585 aa20.27■□□□□ 0.84
LINC00404-201ENST00000418660 USP40Q9NVE5 1235 aa20.27■□□□□ 0.84
LINC00404-201ENST00000418660 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.27■□□□□ 0.84
LINC00404-201ENST00000418660 COG6Q9Y2V7 657 aa20.27■□□□□ 0.84
LINC00404-201ENST00000418660 GAKO14976 1311 aa20.27■□□□□ 0.83
LINC00404-201ENST00000418660 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
LINC00404-201ENST00000418660 AKAP11Q9UKA4 1901 aa20.26■□□□□ 0.83
LINC00404-201ENST00000418660 INHBEP58166 350 aa20.26■□□□□ 0.83
LINC00404-201ENST00000418660 ERICH6Q7L0X2 663 aa20.26■□□□□ 0.83
LINC00404-201ENST00000418660 FAM163AQ96GL9 167 aaPredicted RBP20.26■□□□□ 0.83
LINC00404-201ENST00000418660 MANSC4A6NHS7 340 aaPredicted RBP20.25■□□□□ 0.83
LINC00404-201ENST00000418660 MCAMP43121 646 aa20.25■□□□□ 0.83
LINC00404-201ENST00000418660 MAP3K9P80192 1104 aa20.25■□□□□ 0.83
LINC00404-201ENST00000418660 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
LINC00404-201ENST00000418660 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.25■□□□□ 0.83
LINC00404-201ENST00000418660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.83
LINC00404-201ENST00000418660 DBNDD2Q9BQY9 259 aa20.25■□□□□ 0.83
LINC00404-201ENST00000418660 CHMP4BQ9H444 224 aaKnown RBP20.25■□□□□ 0.83
LINC00404-201ENST00000418660 CAPN15O75808 1086 aa20.24■□□□□ 0.83
LINC00404-201ENST00000418660 MECOMQ03112 1051 aa20.24■□□□□ 0.83
LINC00404-201ENST00000418660 NFIAQ12857 509 aa20.24■□□□□ 0.83
LINC00404-201ENST00000418660 TTC39AQ5SRH9 613 aa20.24■□□□□ 0.83
LINC00404-201ENST00000418660 PI16Q6UXB8 463 aa20.24■□□□□ 0.83
LINC00404-201ENST00000418660 RPAP2Q8IXW5 612 aaPredicted RBP20.24■□□□□ 0.83
LINC00404-201ENST00000418660 ELP3Q9H9T3 547 aa20.24■□□□□ 0.83
LINC00404-201ENST00000418660 ZBTB40Q9NUA8 1239 aa20.24■□□□□ 0.83
LINC00404-201ENST00000418660 TCP10Q12799 353 aa20.23■□□□□ 0.83
LINC00404-201ENST00000418660 DCAF15Q66K64 600 aa20.23■□□□□ 0.83
LINC00404-201ENST00000418660 TBC1D9Q6ZT07 1266 aa20.23■□□□□ 0.83
LINC00404-201ENST00000418660 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
LINC00404-201ENST00000418660 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.23■□□□□ 0.83
LINC00404-201ENST00000418660 ZNF512BQ96KM6 892 aaPredicted RBP20.23■□□□□ 0.83
LINC00404-201ENST00000418660 FAM198AQ9UFP1 575 aa20.23■□□□□ 0.83
LINC00404-201ENST00000418660 CSADQ9Y600 493 aa20.23■□□□□ 0.83
LINC00404-201ENST00000418660 MROH7-TTC4A0A0A0MT08 1334 aa20.23■□□□□ 0.83
LINC00404-201ENST00000418660 TBC1D8O95759 1140 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 GJA5P36382 358 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 GSTO1P78417 241 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 VGLL4Q14135 290 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 HSP90AB4PQ58FF6 505 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 ZNF384Q8TF68 577 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 EAF2Q96CJ1 260 aaPredicted RBP20.22■□□□□ 0.83
LINC00404-201ENST00000418660 OPTNQ96CV9 577 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 IDI2Q9BXS1 227 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 EXOC6BQ9Y2D4 811 aa20.22■□□□□ 0.83
LINC00404-201ENST00000418660 GPR75-ASB3A0A0A6YYF3 556 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 LDHCP07864 332 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 NSUN4Q96CB9 384 aaKnown RBP20.21■□□□□ 0.83
LINC00404-201ENST00000418660 WRNIP1Q96S55 665 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 CFHR5Q9BXR6 569 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 ZNF341Q9BYN7 854 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 RAI14Q9P0K7 980 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 DBNLQ9UJU6 430 aaKnown RBP20.21■□□□□ 0.83
LINC00404-201ENST00000418660 OTOFQ9HC10 1997 aa20.21■□□□□ 0.83
LINC00404-201ENST00000418660 MYH2Q9UKX2 1941 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 HMMRO75330 724 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 ENTPD3O75355 529 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 BTDP43251 543 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 MIGA2Q7L4E1 593 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 IFNL1Q8IU54 200 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 ABHD8Q96I13 439 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 CCDC8Q9H0W5 538 aaPredicted RBP20.2■□□□□ 0.82
LINC00404-201ENST00000418660 SNRKQ9NRH2 765 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 LRP2BPQ9P2M1 347 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 CASP8AP2Q9UKL3 1982 aa20.2■□□□□ 0.82
LINC00404-201ENST00000418660 TESPA1A2RU30 521 aaPredicted RBP20.19■□□□□ 0.82
LINC00404-201ENST00000418660 RGS3P49796 1198 aa20.19■□□□□ 0.82
LINC00404-201ENST00000418660 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
LINC00404-201ENST00000418660 C20orf194Q5TEA3 1177 aa20.19■□□□□ 0.82
LINC00404-201ENST00000418660 ZFPM1Q8IX07 1006 aa20.19■□□□□ 0.82
LINC00404-201ENST00000418660 TLR7Q9NYK1 1049 aaKnown RBP20.19■□□□□ 0.82
LINC00404-201ENST00000418660 RFX7Q2KHR2 1363 aa20.19■□□□□ 0.82
LINC00404-201ENST00000418660 LAMB1P07942 1786 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 SPDYE5A6NIY4 337 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 WDHD1O75717 1129 aaPredicted RBP20.18■□□□□ 0.82
LINC00404-201ENST00000418660 MAP4K4O95819 1239 aaPredicted RBP20.18■□□□□ 0.82
LINC00404-201ENST00000418660 RHBDL3P58872 404 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 DGKZQ13574 1117 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 SIRT2Q8IXJ6 389 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 MCOLN1Q9GZU1 580 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 SNCAIPQ9Y6H5 919 aa20.18■□□□□ 0.82
LINC00404-201ENST00000418660 GPR25O00155 361 aa20.17■□□□□ 0.82
LINC00404-201ENST00000418660 IGF2BP3O00425 579 aaKnown RBP eCLIP20.17■□□□□ 0.82
LINC00404-201ENST00000418660 IGSF3O75054 1194 aa20.17■□□□□ 0.82
LINC00404-201ENST00000418660 CYP2E1P05181 493 aaPredicted RBP20.17■□□□□ 0.82
LINC00404-201ENST00000418660 OTUD7BQ6GQQ9 843 aa20.17■□□□□ 0.82
LINC00404-201ENST00000418660 ERO1BQ86YB8 467 aa20.17■□□□□ 0.82
LINC00404-201ENST00000418660 RHPN1Q8TCX5 695 aa20.17■□□□□ 0.82
LINC00404-201ENST00000418660 ZKSCAN4Q969J2 545 aaPredicted RBP20.17■□□□□ 0.82
LINC00404-201ENST00000418660 MS4A4AQ96JQ5 239 aa20.17■□□□□ 0.82
LINC00404-201ENST00000418660 ZNF112Q9UJU3 913 aa20.17■□□□□ 0.82
LINC00404-201ENST00000418660 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms