RNA–Protein interactions for RNA: ENST00000418185.6

GTF2IRD2B-202, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best)

Gene GTF2IRD2B, Length 3,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-202ENST00000418185 RTN1Q16799 776 aa16.39■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 FBXO38Q6PIJ6 1188 aa16.39■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 SMARCE1Q969G3 411 aa16.39■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ARGLU1Q9NWB6 273 aaPredicted RBP16.39■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 WDHD1O75717 1129 aaPredicted RBP16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 VPS16Q9H269 839 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 PIH1D3Q9NQM4 214 aaKnown RBP16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 BTG4Q9NY30 223 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CDKL5O76039 1030 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 GUCY1A2P33402 732 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 MCAMP43121 646 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 DZIP3Q86Y13 1208 aaKnown RBP16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CDC27P30260 824 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CASQ1P31415 396 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 GRIN1Q05586 938 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 FAM47AQ5JRC9 791 aa16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 IL2RBP14784 551 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 MCM7P33993 719 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TERF1P54274 439 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 FAM182BQ5T319 152 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ADALQ6DHV7 355 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 USP49Q70CQ1 688 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CCDC102AQ96A19 550 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ZBTB1Q9Y2K1 713 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 SSBP05455 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 GYG1P46976 350 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 SETD1AO15047 1707 aaKnown RBP16.37■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TPM1P09493 284 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 FOXO4P98177 505 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 DHX40Q8IX18 779 aaKnown RBP16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 KRT222Q8N1A0 295 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 DLG5Q8TDM6 1919 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 IQCB1Q15051 598 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TRMT1LQ7Z2T5 733 aaKnown RBP16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 NIP7Q9Y221 180 aaKnown RBP eCLIP16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ELP1O95163 1332 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 WTIPA6NIX2 430 aaPredicted RBP16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 PDE6AP16499 860 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 RFX5P48382 616 aaPredicted RBP16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 EVCP57679 992 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 GSDMDP57764 484 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 MYL5Q02045 173 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CAPZA3Q96KX2 299 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 PSMB7Q99436 277 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ZHX3Q9H4I2 956 aa16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 IGHMBP2P38935 993 aaKnown RBP16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 PLA2G4DQ86XP0 818 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CCDC191Q8NCU4 936 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 MRPS25P82663 173 aaKnown RBP16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 KMT5BQ4FZB7 885 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 NLRP5P59047 1200 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CAGE1Q8TC20 777 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 PPP1R13BQ96KQ4 1090 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 SPTLC3Q9NUV7 552 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ZSWIM5Q9P217 1185 aa16.35■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 N4BP3O15049 544 aa16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 USP5P45974 858 aa16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TCIRG1Q13488 830 aa16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 SMAP1Q8IYB5 467 aaPredicted RBP16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 NEK11Q8NG66 645 aa16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 CEMIPQ8WUJ3 1361 aa16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 EPB41L2O43491 1005 aaKnown RBP16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 OXER1Q8TDS5 423 aa16.34■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 TFRCP02786 760 aaKnown RBP16.33■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 LMAN1P49257 510 aa16.33■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 ARMCX5Q6P1M9 558 aa16.33■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 APOA5Q6Q788 366 aa16.33■□□□□ 0.21
GTF2IRD2B-202ENST00000418185 SLC5A1P13866 664 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 MTF1Q14872 753 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 RASGRP4Q8TDF6 673 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 LLPHQ9BRT6 129 aaKnown RBP16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 PCDHB6Q9Y5E3 794 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 RRAGBQ5VZM2 374 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 FMR1NBQ8N0W7 255 aaPredicted RBP16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 ZNF397Q8NF99 534 aaPredicted RBP16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 EPSTI1Q96J88 318 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 BAG1Q99933 345 aaPredicted RBP16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 REREQ9P2R6 1566 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 RIMBP3CA6NJZ7 1639 aa16.33■□□□□ 0.2
GTF2IRD2B-202ENST00000418185 RIMBP3BA6NNM3 1639 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms