RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 SNCAIPQ9Y6H5 919 aa27.08■■□□□ 1.93
ACTB-203ENST00000417101 SEMA3EO15041 775 aa27.07■■□□□ 1.92
ACTB-203ENST00000417101 DCAF15Q66K64 600 aa27.07■■□□□ 1.92
ACTB-203ENST00000417101 CDC42EP5Q6NZY7 148 aa27.07■■□□□ 1.92
ACTB-203ENST00000417101 RPAP1Q9BWH6 1393 aaPredicted RBP27.07■■□□□ 1.92
ACTB-203ENST00000417101 PDE4DIPQ5VU43 2346 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 SRGAP3O43295 1099 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 SP3Q02447 781 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 CCDC102BQ68D86 513 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 MIGA2Q7L4E1 593 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 ERO1BQ86YB8 467 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 FAM151AQ8WW52 585 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 SALL1Q9NSC2 1324 aa27.06■■□□□ 1.92
ACTB-203ENST00000417101 IPO8O15397 1037 aaKnown RBP27.05■■□□□ 1.92
ACTB-203ENST00000417101 TIMM10P62072 90 aa27.05■■□□□ 1.92
ACTB-203ENST00000417101 TCP10Q12799 353 aa27.05■■□□□ 1.92
ACTB-203ENST00000417101 TAF1CQ15572 869 aaPredicted RBP27.05■■□□□ 1.92
ACTB-203ENST00000417101 ZNF341Q9BYN7 854 aa27.05■■□□□ 1.92
ACTB-203ENST00000417101 NFIAQ12857 509 aa27.04■■□□□ 1.92
ACTB-203ENST00000417101 FAM43AQ8N2R8 423 aa27.04■■□□□ 1.92
ACTB-203ENST00000417101 FRAT1Q92837 279 aaPredicted RBP27.04■■□□□ 1.92
ACTB-203ENST00000417101 USP40Q9NVE5 1235 aa27.04■■□□□ 1.92
ACTB-203ENST00000417101 TNNQ9UQP3 1299 aa27.04■■□□□ 1.92
ACTB-203ENST00000417101 BCAR3O75815 825 aa27.03■■□□□ 1.92
ACTB-203ENST00000417101 TRIM27P14373 513 aa27.03■■□□□ 1.92
ACTB-203ENST00000417101 MTX1Q13505 466 aa27.03■■□□□ 1.92
ACTB-203ENST00000417101 EFCC1Q9HA90 598 aa27.03■■□□□ 1.92
ACTB-203ENST00000417101 ZFYVE28Q9HCC9 887 aa27.03■■□□□ 1.92
ACTB-203ENST00000417101 CENPFP49454 3210 aa27.02■■□□□ 1.92
ACTB-203ENST00000417101 IRF6O14896 467 aa27.02■■□□□ 1.92
ACTB-203ENST00000417101 CETPP11597 493 aa27.02■■□□□ 1.92
ACTB-203ENST00000417101 TFCP2Q12800 502 aa27.02■■□□□ 1.92
ACTB-203ENST00000417101 FAM198AQ9UFP1 575 aa27.02■■□□□ 1.92
ACTB-203ENST00000417101 A0A1B0GUL7 405 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 INPP5BP32019 993 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 CAP1Q01518 475 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 PPIL2Q13356 520 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 SNAPC2Q13487 334 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 RASGRF1Q13972 1273 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 ATF7IPQ6VMQ6 1270 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 ZGPATQ8N5A5 531 aaKnown RBP27.01■■□□□ 1.91
ACTB-203ENST00000417101 PTPN22Q9Y2R2 807 aa27.01■■□□□ 1.91
ACTB-203ENST00000417101 ZBTB22O15209 634 aa27■■□□□ 1.91
ACTB-203ENST00000417101 CLUAP1Q96AJ1 413 aa27■■□□□ 1.91
ACTB-203ENST00000417101 XAGE2Q96GT9 111 aa27■■□□□ 1.91
ACTB-203ENST00000417101 ABCF2Q9UG63 623 aa27■■□□□ 1.91
ACTB-203ENST00000417101 AKAP2Q9Y2D5 859 aa27■■□□□ 1.91
ACTB-203ENST00000417101 BTBD19C9JJ37 291 aa26.98■■□□□ 1.91
ACTB-203ENST00000417101 WDHD1O75717 1129 aaPredicted RBP26.98■■□□□ 1.91
ACTB-203ENST00000417101 GNAI2P04899 355 aa26.98■■□□□ 1.91
ACTB-203ENST00000417101 MVPQ14764 893 aaKnown RBP26.98■■□□□ 1.91
ACTB-203ENST00000417101 DZIP1Q86YF9 867 aaKnown RBP26.98■■□□□ 1.91
ACTB-203ENST00000417101 ZFPM1Q8IX07 1006 aa26.98■■□□□ 1.91
ACTB-203ENST00000417101 ZNF112Q9UJU3 913 aa26.98■■□□□ 1.91
ACTB-203ENST00000417101 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.98■■□□□ 1.91
ACTB-203ENST00000417101 PPATQ06203 517 aa26.97■■□□□ 1.91
ACTB-203ENST00000417101 NEUROD6Q96NK8 337 aa26.97■■□□□ 1.91
ACTB-203ENST00000417101 GAKO14976 1311 aa26.96■■□□□ 1.91
ACTB-203ENST00000417101 PDS5AQ29RF7 1337 aaKnown RBP26.96■■□□□ 1.91
ACTB-203ENST00000417101 ZCCHC17Q9NP64 241 aaKnown RBP26.96■■□□□ 1.91
ACTB-203ENST00000417101 RGS3P49796 1198 aa26.95■■□□□ 1.9
ACTB-203ENST00000417101 SPTY2D1Q68D10 685 aaPredicted RBP26.95■■□□□ 1.9
ACTB-203ENST00000417101 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.95■■□□□ 1.9
ACTB-203ENST00000417101 AK9Q5TCS8 1911 aa26.94■■□□□ 1.9
ACTB-203ENST00000417101 PNMA6EA0A0J9YXQ4 647 aa26.94■■□□□ 1.9
ACTB-203ENST00000417101 TLR2O60603 784 aa26.94■■□□□ 1.9
ACTB-203ENST00000417101 ARHGEF6Q15052 776 aa26.94■■□□□ 1.9
ACTB-203ENST00000417101 SLF2Q8IX21 1173 aa26.94■■□□□ 1.9
ACTB-203ENST00000417101 IDI2Q9BXS1 227 aa26.94■■□□□ 1.9
ACTB-203ENST00000417101 GORABQ5T7V8 394 aa26.93■■□□□ 1.9
ACTB-203ENST00000417101 ENTPD3O75355 529 aa26.92■■□□□ 1.9
ACTB-203ENST00000417101 G3BP1Q13283 466 aaKnown RBP eCLIP26.92■■□□□ 1.91e-28■■□□□ 12.1
ACTB-203ENST00000417101 NOL9Q5SY16 702 aaKnown RBP26.92■■□□□ 1.9
ACTB-203ENST00000417101 ZKSCAN2Q63HK3 967 aa26.92■■□□□ 1.9
ACTB-203ENST00000417101 ZSCAN29Q8IWY8 852 aaPredicted RBP26.92■■□□□ 1.9
ACTB-203ENST00000417101 TMEM57Q8N5G2 664 aa26.92■■□□□ 1.9
ACTB-203ENST00000417101 ARMC5Q96C12 935 aa26.92■■□□□ 1.9
ACTB-203ENST00000417101 FAM163AQ96GL9 167 aaPredicted RBP26.92■■□□□ 1.9
ACTB-203ENST00000417101 HMG20BQ9P0W2 317 aa26.92■■□□□ 1.9
ACTB-203ENST00000417101 MYH2Q9UKX2 1941 aa26.92■■□□□ 1.9
ACTB-203ENST00000417101 POTEFA5A3E0 1075 aa26.91■■□□□ 1.9
ACTB-203ENST00000417101 BTDP43251 543 aa26.91■■□□□ 1.9
ACTB-203ENST00000417101 MECOMQ03112 1051 aa26.91■■□□□ 1.9
ACTB-203ENST00000417101 ERICH6Q7L0X2 663 aa26.91■■□□□ 1.9
ACTB-203ENST00000417101 KCNH4Q9UQ05 1017 aa26.91■■□□□ 1.9
ACTB-203ENST00000417101 MKI67P46013 3256 aaKnown RBP26.91■■□□□ 1.9
ACTB-203ENST00000417101 MROH7-TTC4A0A0A0MT08 1334 aa26.9■■□□□ 1.9
ACTB-203ENST00000417101 RFX7Q2KHR2 1363 aa26.9■■□□□ 1.9
ACTB-203ENST00000417101 ATRNL1Q5VV63 1379 aa26.9■■□□□ 1.9
ACTB-203ENST00000417101 HNRNPUQ00839 825 aaKnown RBP eCLIP26.9■■□□□ 1.9
ACTB-203ENST00000417101 PI16Q6UXB8 463 aa26.9■■□□□ 1.9
ACTB-203ENST00000417101 SH3BP5LQ7L8J4 393 aa26.9■■□□□ 1.9
ACTB-203ENST00000417101 PICALMQ13492 652 aa26.89■■□□□ 1.9
ACTB-203ENST00000417101 ANKRD23Q86SG2 305 aa26.89■■□□□ 1.9
ACTB-203ENST00000417101 SPATA5Q8NB90 893 aa26.89■■□□□ 1.9
ACTB-203ENST00000417101 DDX4Q9NQI0 724 aaKnown RBP26.89■■□□□ 1.9
ACTB-203ENST00000417101 PTCH2Q9Y6C5 1203 aa26.89■■□□□ 1.9
ACTB-203ENST00000417101 BRCA2P51587 3418 aa26.89■■□□□ 1.89
ACTB-203ENST00000417101 PHF20L1A8MW92 1017 aa26.88■■□□□ 1.89
ACTB-203ENST00000417101 PDHXO00330 501 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms