RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 NR2E3Q9Y5X4 410 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 UNC80Q8N2C7 3258 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 ADGRA2Q96PE1 1338 aa11.86□□□□□ -0.51
LINC01238-201ENST00000416204 GRM8O00222 908 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 EVI5O60447 810 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 GNRH1P01148 92 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 BCAMP50895 628 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 MOGSQ13724 837 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 UBE4AQ14139 1066 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 LRRC24Q50LG9 513 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 APOBEC3HQ6NTF7 200 aaKnown RBP11.85□□□□□ -0.51
LINC01238-201ENST00000416204 SLC4A10Q6U841 1118 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 ANKRD23Q86SG2 305 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 ZNF341Q9BYN7 854 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 C9orf78Q9NZ63 289 aaPredicted RBP11.85□□□□□ -0.51
LINC01238-201ENST00000416204 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
LINC01238-201ENST00000416204 TFRCP02786 760 aaKnown RBP11.84□□□□□ -0.51
LINC01238-201ENST00000416204 HOXD10P28358 340 aa11.84□□□□□ -0.51
LINC01238-201ENST00000416204 ZEB1P37275 1124 aaPredicted RBP11.84□□□□□ -0.51
LINC01238-201ENST00000416204 UBXN2AP68543 259 aa11.84□□□□□ -0.51
LINC01238-201ENST00000416204 PPATQ06203 517 aa11.84□□□□□ -0.51
LINC01238-201ENST00000416204 DCAF15Q66K64 600 aa11.84□□□□□ -0.51
LINC01238-201ENST00000416204 Q7L0L9 218 aa11.84□□□□□ -0.51
LINC01238-201ENST00000416204 FBXO33Q7Z6M2 555 aa11.84□□□□□ -0.51
LINC01238-201ENST00000416204 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
LINC01238-201ENST00000416204 DEFB118Q96PH6 123 aa11.84□□□□□ -0.51
LINC01238-201ENST00000416204 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
LINC01238-201ENST00000416204 ADCY3O60266 1144 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 VAMP4O75379 141 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 INHAP05111 366 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 FCGRTP55899 365 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 EXOSC9Q06265 439 aaKnown RBP11.83□□□□□ -0.52
LINC01238-201ENST00000416204 NFIAQ12857 509 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 METTL24Q5JXM2 366 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 GPAT2Q6NUI2 795 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 KLHDC4Q8TBB5 520 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 KAZALD1Q96I82 304 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 ZDHHC15Q96MV8 337 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 ZMYND8Q9ULU4 1186 aaPredicted RBP11.83□□□□□ -0.52
LINC01238-201ENST00000416204 CUL9Q8IWT3 2517 aa11.83□□□□□ -0.52
LINC01238-201ENST00000416204 SGPL1O95470 568 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 FLT3LGP49771 235 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 DIXDC1Q155Q3 683 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 FAM83AQ86UY5 434 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 ZFPM1Q8IX07 1006 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 C7orf61Q8IZ16 206 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 PAWRQ96IZ0 340 aaKnown RBP11.82□□□□□ -0.52
LINC01238-201ENST00000416204 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
LINC01238-201ENST00000416204 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.82□□□□□ -0.52
LINC01238-201ENST00000416204 KCNH4Q9UQ05 1017 aa11.82□□□□□ -0.52
LINC01238-201ENST00000416204 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
LINC01238-201ENST00000416204 BCRP11274 1271 aa11.81□□□□□ -0.52
LINC01238-201ENST00000416204 SYN1P17600 705 aa11.81□□□□□ -0.52
LINC01238-201ENST00000416204 HDLBPQ00341 1268 aaKnown RBP11.81□□□□□ -0.52
LINC01238-201ENST00000416204 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
LINC01238-201ENST00000416204 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
LINC01238-201ENST00000416204 SLAIN1Q8ND83 568 aa11.81□□□□□ -0.52
LINC01238-201ENST00000416204 TBC1D22AQ8WUA7 517 aa11.81□□□□□ -0.52
LINC01238-201ENST00000416204 BICC1Q9H694 974 aaKnown RBP11.81□□□□□ -0.52
LINC01238-201ENST00000416204 LAMA2P24043 3122 aaKnown RBP11.81□□□□□ -0.52
LINC01238-201ENST00000416204 MROH5Q6ZUA9 1318 aa11.81□□□□□ -0.52
LINC01238-201ENST00000416204 CDC42EP5Q6NZY7 148 aa11.8□□□□□ -0.52
LINC01238-201ENST00000416204 DEFB123Q8N688 67 aa11.8□□□□□ -0.52
LINC01238-201ENST00000416204 FAM151AQ8WW52 585 aa11.8□□□□□ -0.52
LINC01238-201ENST00000416204 HOOK2Q96ED9 719 aa11.8□□□□□ -0.52
LINC01238-201ENST00000416204 DAGLAQ9Y4D2 1042 aa11.8□□□□□ -0.52
LINC01238-201ENST00000416204 ZHX2Q9Y6X8 837 aa11.8□□□□□ -0.52
LINC01238-201ENST00000416204 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
LINC01238-201ENST00000416204 FKBP1CQ5VVH2 108 aa11.79□□□□□ -0.52
LINC01238-201ENST00000416204 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
LINC01238-201ENST00000416204 SRCIN1Q9C0H9 1055 aa11.79□□□□□ -0.52
LINC01238-201ENST00000416204 FAM198AQ9UFP1 575 aa11.79□□□□□ -0.52
LINC01238-201ENST00000416204 ZNF112Q9UJU3 913 aa11.79□□□□□ -0.52
LINC01238-201ENST00000416204 TRIM75PA6NK02 468 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 PDE8BO95263 885 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 TRIM32Q13049 653 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 HHIPL2Q6UWX4 724 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 ANKRD44Q8N8A2 993 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 USP40Q9NVE5 1235 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 EYSQ5T1H1 3165 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 RPAP1Q9BWH6 1393 aaPredicted RBP11.78□□□□□ -0.52
LINC01238-201ENST00000416204 VCANP13611 3396 aa11.78□□□□□ -0.52
LINC01238-201ENST00000416204 A0A0G2JLL6 359 aaPredicted RBP11.77□□□□□ -0.53
LINC01238-201ENST00000416204 ALDH1L1O75891 902 aa11.77□□□□□ -0.53
LINC01238-201ENST00000416204 PRDX5P30044 214 aa11.77□□□□□ -0.53
LINC01238-201ENST00000416204 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.53
LINC01238-201ENST00000416204 PRRT2Q7Z6L0 340 aaPredicted RBP11.77□□□□□ -0.53
LINC01238-201ENST00000416204 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
LINC01238-201ENST00000416204 SMCR8Q8TEV9 937 aaPredicted RBP11.77□□□□□ -0.53
LINC01238-201ENST00000416204 PICK1Q9NRD5 415 aa11.77□□□□□ -0.53
LINC01238-201ENST00000416204 MAST3O60307 1309 aa11.77□□□□□ -0.53
LINC01238-201ENST00000416204 IL16Q14005 1332 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms