RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 TMCO5BA8MYB1 307 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 TCP10L2B9ZVM9 353 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 SNW1Q13573 536 aaKnown RBP17.75■□□□□ 0.43
PHRF1-203ENST00000416188 UVSSAQ2YD98 709 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 TGFBRAP1Q8WUH2 860 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 PYM1Q9BRP8 204 aaKnown RBP17.75■□□□□ 0.43
PHRF1-203ENST00000416188 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 KIF22Q14807 665 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 TXNRD1Q16881 649 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 SYCP3Q8IZU3 236 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 BBOX1O75936 387 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 MARCKSP29966 332 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-203ENST00000416188 DNM1Q05193 864 aaKnown RBP17.75■□□□□ 0.43
PHRF1-203ENST00000416188 IFFO1Q0D2I5 559 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 RPS6KA4O75676 772 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 CHST3Q7LGC8 479 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
PHRF1-203ENST00000416188 TBCAO75347 108 aaKnown RBP17.74■□□□□ 0.43
PHRF1-203ENST00000416188 ERFEQ4G0M1 354 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 ZKSCAN3Q9BRR0 538 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 XDHP47989 1333 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 POLR3GO15318 223 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-203ENST00000416188 KCNG4Q8TDN1 519 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 HELLSQ9NRZ9 838 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 NOP2P46087 812 aaKnown RBP17.74■□□□□ 0.43
PHRF1-203ENST00000416188 GNG11P61952 73 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 CHRNDQ07001 517 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.74■□□□□ 0.43
PHRF1-203ENST00000416188 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-203ENST00000416188 HLTFQ14527 1009 aaKnown RBP eCLIP17.74■□□□□ 0.43
PHRF1-203ENST00000416188 ANO6Q4KMQ2 910 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 SPON1Q9HCB6 807 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
PHRF1-203ENST00000416188 PRDM1O75626 825 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 ZNF830Q96NB3 372 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-203ENST00000416188 CDC42BPAQ5VT25 1732 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 FAM114A1Q8IWE2 563 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 MRPS27Q92552 414 aaKnown RBP17.73■□□□□ 0.43
PHRF1-203ENST00000416188 APPBP2Q92624 585 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 BACH1O14867 736 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 UBASH3AP57075 661 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 VPS72Q15906 364 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 ALS2CR12Q96Q35 445 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 ZBTB7BO15156 539 aaPredicted RBP17.73■□□□□ 0.43
PHRF1-203ENST00000416188 MCM3P25205 808 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 PRPF4BQ13523 1007 aaKnown RBP17.73■□□□□ 0.43
PHRF1-203ENST00000416188 SPECC1Q5M775 1068 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 RRAGBQ5VZM2 374 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 CPXCR1Q8N123 301 aa17.73■□□□□ 0.43
PHRF1-203ENST00000416188 ZBED4O75132 1171 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 F13A1P00488 732 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 ZAP70P43403 619 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 SLC27A3Q5K4L6 730 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 AS3MTQ9HBK9 375 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 KDRP35968 1356 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 PLA2R1Q13018 1463 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 EXOC1Q9NV70 894 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 ADGRB3O60242 1522 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 AKR1B10O60218 316 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 GREM2Q9H772 168 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 DBNDD1Q9H9R9 158 aa17.72■□□□□ 0.43
PHRF1-203ENST00000416188 BCCIPQ9P287 314 aaKnown RBP eCLIP17.72■□□□□ 0.43
PHRF1-203ENST00000416188 CYP27B1O15528 508 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 NPR1P16066 1061 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 CGNQ9P2M7 1197 aaKnown RBP17.71■□□□□ 0.43
PHRF1-203ENST00000416188 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 OVOS2A0A0J9YW53 1432 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 OVOS2Q6IE36 1432 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 SHTN1A0MZ66 631 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 SLC1A4P43007 532 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 NCBP1Q09161 790 aaKnown RBP17.71■□□□□ 0.43
PHRF1-203ENST00000416188 MAPK8IP2Q13387 824 aaPredicted RBP17.71■□□□□ 0.43
PHRF1-203ENST00000416188 SNX21Q969T3 373 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 CALML3P27482 149 aa17.71■□□□□ 0.43
PHRF1-203ENST00000416188 BLMP54132 1417 aaPredicted RBP17.71■□□□□ 0.43
PHRF1-203ENST00000416188 GPAA1O43292 621 aa17.71■□□□□ 0.42
PHRF1-203ENST00000416188 GNA11P29992 359 aa17.71■□□□□ 0.42
PHRF1-203ENST00000416188 R3HDM1Q15032 1099 aaKnown RBP17.71■□□□□ 0.42
PHRF1-203ENST00000416188 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.42
PHRF1-203ENST00000416188 C1orf167Q5SNV9 1468 aa17.71■□□□□ 0.42
PHRF1-203ENST00000416188 GOLGA6L9A6NEM1 432 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 FAM200AQ8TCP9 573 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 JADE2Q9NQC1 790 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 HEG1Q9ULI3 1381 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 RAD17O75943 681 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 AK2P54819 239 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 MAP2K1Q02750 393 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-203ENST00000416188 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 RTKN2Q8IZC4 609 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 STAT6P42226 847 aa17.7■□□□□ 0.42
PHRF1-203ENST00000416188 BCAMP50895 628 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms