RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 PPP2R3AQ06190 1150 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 ARID5BQ14865 1188 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 JPH2Q9BR39 696 aaPredicted RBP8.94□□□□□ -0.98
SIK3-203ENST00000415541 PARD6BQ9BYG5 372 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 SHTN1A0MZ66 631 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 GCFC2P16383 781 aaKnown RBP8.94□□□□□ -0.98
SIK3-203ENST00000415541 CNNM3Q8NE01 707 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 CTCFLQ8NI51 663 aaPredicted RBP8.94□□□□□ -0.98
SIK3-203ENST00000415541 SSH3Q8TE77 659 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 OSBPL5Q9H0X9 879 aaPredicted RBP8.94□□□□□ -0.98
SIK3-203ENST00000415541 ZBTB12Q9Y330 459 aaPredicted RBP8.94□□□□□ -0.98
SIK3-203ENST00000415541 NRKQ7Z2Y5 1582 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 CHUKO15111 745 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 SCP2P22307 547 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 TXLNAP40222 546 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 LRRC31Q6UY01 552 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 SPATS2LQ9NUQ6 558 aaKnown RBP8.94□□□□□ -0.98
SIK3-203ENST00000415541 MST1RQ04912 1400 aa8.94□□□□□ -0.98
SIK3-203ENST00000415541 ITSN1Q15811 1721 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 AKAP12Q02952 1782 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 CRYMQ14894 314 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 RALYLQ86SE5 291 aaKnown RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 AFAP1L1Q8TED9 768 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 N4BP2L2Q92802 583 aaPredicted RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 EVI5LQ96CN4 794 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 TCEANC2Q96MN5 208 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 NUCKS1Q9H1E3 243 aaKnown RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 CPSF2Q9P2I0 782 aaKnown RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 ZBTB1Q9Y2K1 713 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 FAN1Q9Y2M0 1017 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 CYP46A1Q9Y6A2 500 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 ANKRD65E5RJM6 399 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 H3BQV1 296 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 IPO7O95373 1038 aaKnown RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 GJB2P29033 226 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 C11orf91Q3C1V1 193 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 RRP12Q5JTH9 1297 aaKnown RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 E4F1Q66K89 784 aaPredicted RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 ANKRD18AQ8IVF6 992 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 CEP112Q8N8E3 955 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 SMARCC1Q92922 1105 aaPredicted RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 ITFG2Q969R8 447 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 EDC3Q96F86 508 aaKnown RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 SH3GL3Q99963 347 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 DBNDD2Q9BQY9 259 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 SH2B1Q9NRF2 756 aaPredicted RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 AKAP2Q9Y2D5 859 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 ARID4AP29374 1257 aaPredicted RBP8.93□□□□□ -0.98
SIK3-203ENST00000415541 LRRN4CLQ8ND94 238 aa8.93□□□□□ -0.98
SIK3-203ENST00000415541 H3BQF6 201 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 MAP2K7O14733 419 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 CHMLP26374 656 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 RFC4P35249 363 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 LARP1BQ659C4 914 aaKnown RBP8.92□□□□□ -0.98
SIK3-203ENST00000415541 FOXR1Q6PIV2 292 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 HNRNPLLQ8WVV9 542 aaKnown RBP8.92□□□□□ -0.98
SIK3-203ENST00000415541 CDCA7Q9BWT1 371 aaPredicted RBP8.92□□□□□ -0.98
SIK3-203ENST00000415541 ODF2LQ9ULJ1 636 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 ATP10DQ9P241 1426 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
SIK3-203ENST00000415541 PES1O00541 588 aaKnown RBP8.92□□□□□ -0.98
SIK3-203ENST00000415541 GNPATO15228 680 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
SIK3-203ENST00000415541 PSMA5P28066 241 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 CDR1P51861 262 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 BLOC1S2Q6QNY1 142 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 TMC6Q7Z403 805 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 KIAA1328Q86T90 577 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 LRP2BPQ9P2M1 347 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 MTMR6Q9Y217 621 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 RBM43Q6ZSC3 357 aaKnown RBP8.92□□□□□ -0.98
SIK3-203ENST00000415541 ARMC2Q8NEN0 867 aa8.92□□□□□ -0.98
SIK3-203ENST00000415541 CPLX1O14810 134 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 DTNBO60941 627 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 IGKV5-2P06315 115 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 IL15P40933 162 aaPredicted RBP8.91□□□□□ -0.98
SIK3-203ENST00000415541 TCIRG1Q13488 830 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 RBBP5Q15291 538 aaKnown RBP8.91□□□□□ -0.98
SIK3-203ENST00000415541 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 EAF2Q96CJ1 260 aaPredicted RBP8.91□□□□□ -0.98
SIK3-203ENST00000415541 PALD1Q9ULE6 856 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 TCHHQ07283 1943 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 LOC102724428A0A0B4J2F2 783 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 SIK1P57059 783 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 NAIF1Q69YI7 327 aaPredicted RBP8.91□□□□□ -0.98
SIK3-203ENST00000415541 NFXL1Q6ZNB6 911 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 FCHSD1Q86WN1 690 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.91□□□□□ -0.982e-6■■■□□ 14.7
SIK3-203ENST00000415541 OSBPL3Q9H4L5 887 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 PPFIA3O75145 1194 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 GNG11P61952 73 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 SCRN1Q12765 414 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 SKIDA1Q1XH10 827 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 CCDC73Q6ZRK6 1079 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 MICALCLQ6ZW33 695 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 UNC5CLQ8IV45 518 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 CCDC87Q9NVE4 849 aa8.91□□□□□ -0.98
SIK3-203ENST00000415541 MTMR7Q9Y216 660 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms