RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 VIL1P09327 827 aaKnown RBP18.52■□□□□ 0.56
SHMT2-202ENST00000414700 RRAGDQ9NQL2 400 aaPredicted RBP18.52■□□□□ 0.56
SHMT2-202ENST00000414700 APPP05067 770 aa18.52■□□□□ 0.55
SHMT2-202ENST00000414700 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.55
SHMT2-202ENST00000414700 GSTO1P78417 241 aa18.52■□□□□ 0.55
SHMT2-202ENST00000414700 CREB3L3Q68CJ9 461 aa18.52■□□□□ 0.55
SHMT2-202ENST00000414700 DAGLAQ9Y4D2 1042 aa18.52■□□□□ 0.55
SHMT2-202ENST00000414700 SLC4A4Q9Y6R1 1079 aa18.52■□□□□ 0.55
SHMT2-202ENST00000414700 BTDP43251 543 aa18.51■□□□□ 0.55
SHMT2-202ENST00000414700 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
SHMT2-202ENST00000414700 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
SHMT2-202ENST00000414700 GAKO14976 1311 aa18.51■□□□□ 0.55
SHMT2-202ENST00000414700 SLC27A2O14975 620 aa18.5■□□□□ 0.55
SHMT2-202ENST00000414700 CYP21A2P08686 494 aa18.5■□□□□ 0.55
SHMT2-202ENST00000414700 COL9A3Q14050 684 aaPredicted RBP18.5■□□□□ 0.55
SHMT2-202ENST00000414700 SH3RF3Q8TEJ3 882 aaPredicted RBP18.5■□□□□ 0.55
SHMT2-202ENST00000414700 FAM163AQ96GL9 167 aaPredicted RBP18.5■□□□□ 0.55
SHMT2-202ENST00000414700 GMLQ99445 158 aa18.5■□□□□ 0.55
SHMT2-202ENST00000414700 GPR75-ASB3A0A0A6YYF3 556 aa18.5■□□□□ 0.55
SHMT2-202ENST00000414700 PATL2C9JE40 543 aaKnown RBP18.5■□□□□ 0.55
SHMT2-202ENST00000414700 MCCP23508 829 aa18.5■□□□□ 0.55
SHMT2-202ENST00000414700 IFNL3Q8IZI9 196 aa18.5■□□□□ 0.55
SHMT2-202ENST00000414700 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
SHMT2-202ENST00000414700 FZD9O00144 591 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 IGSF3O75054 1194 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 LDHCP07864 332 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 LMNB1P20700 586 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 ADCK5Q3MIX3 580 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 TMED8Q6PL24 325 aaPredicted RBP18.49■□□□□ 0.55
SHMT2-202ENST00000414700 CRKP46108 304 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 HAND2P61296 217 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 CIAPIN1Q6FI81 312 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
SHMT2-202ENST00000414700 SMIM22K7EJ46 135 aa18.48■□□□□ 0.55
SHMT2-202ENST00000414700 RHBDL3P58872 404 aa18.48■□□□□ 0.55
SHMT2-202ENST00000414700 PPP4CP60510 307 aa18.48■□□□□ 0.55
SHMT2-202ENST00000414700 GPR162Q16538 588 aa18.48■□□□□ 0.55
SHMT2-202ENST00000414700 KCNB2Q92953 911 aa18.48■□□□□ 0.55
SHMT2-202ENST00000414700 TEKT1Q969V4 418 aa18.48■□□□□ 0.55
SHMT2-202ENST00000414700 SHTN1A0MZ66 631 aa18.47■□□□□ 0.55
SHMT2-202ENST00000414700 GNAT2P19087 354 aa18.47■□□□□ 0.55
SHMT2-202ENST00000414700 APOBEC3HQ6NTF7 200 aaKnown RBP18.47■□□□□ 0.55
SHMT2-202ENST00000414700 SLF2Q8IX21 1173 aa18.47■□□□□ 0.55
SHMT2-202ENST00000414700 BAG3O95817 575 aa18.47■□□□□ 0.55
SHMT2-202ENST00000414700 HHIPL2Q6UWX4 724 aa18.47■□□□□ 0.55
SHMT2-202ENST00000414700 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
SHMT2-202ENST00000414700 LAMA4Q16363 1823 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 RBM5P52756 815 aaKnown RBP eCLIP18.46■□□□□ 0.55
SHMT2-202ENST00000414700 ANAPC15P60006 121 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 EVX2Q03828 476 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 STOX1Q6ZVD7 989 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 NOL10Q9BSC4 688 aaKnown RBP18.46■□□□□ 0.55
SHMT2-202ENST00000414700 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
SHMT2-202ENST00000414700 CRNKL1Q9BZJ0 848 aaKnown RBP18.46■□□□□ 0.55
SHMT2-202ENST00000414700 NBPF3Q9H094 633 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 NAPBQ9H115 298 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 ECM29Q5VYK3 1845 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
SHMT2-202ENST00000414700 CPA1P15085 419 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 TDO2P48775 406 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 TGFBRAP1Q8WUH2 860 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 IL17RAQ96F46 866 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 DCP1AQ9NPI6 582 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-202ENST00000414700 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 FOCADQ5VW36 1801 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 CYP2D7A0A087X1C5 515 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 ZKSCAN1P17029 563 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-202ENST00000414700 EIF6P56537 245 aaKnown RBP18.45■□□□□ 0.54
SHMT2-202ENST00000414700 ALX1Q15699 326 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 SLC4A8Q2Y0W8 1093 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 RNF20Q5VTR2 975 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 MKRN1Q9UHC7 482 aaKnown RBP18.45■□□□□ 0.54
SHMT2-202ENST00000414700 SERPINA10Q9UK55 444 aa18.45■□□□□ 0.54
SHMT2-202ENST00000414700 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
SHMT2-202ENST00000414700 BECN1Q14457 450 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 TNIP1Q15025 636 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 CFAP100Q494V2 611 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 CDC42EP5Q6NZY7 148 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 AGBL3Q8NEM8 1001 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 CTNNA3Q9UI47 895 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 NAV1Q8NEY1 1877 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 USP17L8P0C7I0 530 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 HDLBPQ00341 1268 aaKnown RBP18.44■□□□□ 0.54
SHMT2-202ENST00000414700 IMMTQ16891 758 aaKnown RBP18.44■□□□□ 0.54
SHMT2-202ENST00000414700 TEX11Q8IYF3 940 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 PRMT6Q96LA8 375 aaPredicted RBP18.44■□□□□ 0.54
SHMT2-202ENST00000414700 JAKMIP1Q96N16 626 aaKnown RBP18.44■□□□□ 0.54
SHMT2-202ENST00000414700 MRIQ9BWK5 157 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 NACAP1Q9BZK3 213 aa18.44■□□□□ 0.54
SHMT2-202ENST00000414700 ZMYM6O95789 1325 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 ZNF213O14771 459 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 USP5P45974 858 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 CACNB3P54284 484 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 TSGA10IPQ3SY00 556 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 TBC1D10CQ8IV04 446 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 MAPKAPK5Q8IW41 473 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 STK11IPQ8N1F8 1099 aa18.43■□□□□ 0.54
SHMT2-202ENST00000414700 INCENPQ9NQS7 918 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms