RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ZBTB22O15209 634 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 CFHR5Q9BXR6 569 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 CASP8AP2Q9UKL3 1982 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 TBC1D8O95759 1140 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 OTUD7BQ6GQQ9 843 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 APOBEC3HQ6NTF7 200 aaKnown RBP20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 CTU1Q7Z7A3 348 aaKnown RBP20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 CLMNQ96JQ2 1002 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 TEPSINQ96N21 525 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 TMEM39BQ9GZU3 492 aa20.75■□□□□ 0.91
SCAMP4-204ENST00000414057 LDHBP07195 334 aaKnown RBP20.74■□□□□ 0.91
SCAMP4-204ENST00000414057 SIRT2Q8IXJ6 389 aa20.74■□□□□ 0.91
SCAMP4-204ENST00000414057 SALL1Q9NSC2 1324 aa20.74■□□□□ 0.91
SCAMP4-204ENST00000414057 GPR25O00155 361 aa20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 PHKA1P46020 1223 aa20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 MAP3K9P80192 1104 aa20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 PKN2Q16513 984 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 CCDC102BQ68D86 513 aa20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 IFNL1Q8IU54 200 aa20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 ZNF296Q8WUU4 475 aaPredicted RBP20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 CSADQ9Y600 493 aa20.72■□□□□ 0.91
SCAMP4-204ENST00000414057 CACNB3P54284 484 aa20.71■□□□□ 0.91
SCAMP4-204ENST00000414057 ATP8B2P98198 1209 aa20.71■□□□□ 0.91
SCAMP4-204ENST00000414057 PDS5AQ29RF7 1337 aaKnown RBP20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 A0A1B0GUL7 405 aa20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 PRDX5P30044 214 aa20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 TIMM10P62072 90 aa20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 G3BP1Q13283 466 aaKnown RBP eCLIP20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 DCAF15Q66K64 600 aa20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 SLF2Q8IX21 1173 aa20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 DCTPP1Q9H773 170 aa20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 ELP3Q9H9T3 547 aa20.7■□□□□ 0.9
SCAMP4-204ENST00000414057 FKTNO75072 461 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 TFCP2Q12800 502 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 SPTY2D1Q68D10 685 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 OPTNQ96CV9 577 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 DAGLAQ9Y4D2 1042 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 RPAP1Q9BWH6 1393 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 ADORA1P30542 326 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 GORABQ5T7V8 394 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 CDAN1Q8IWY9 1227 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 FAM151AQ8WW52 585 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 XAGE2Q96GT9 111 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 NEUROD6Q96NK8 337 aa20.69■□□□□ 0.9
SCAMP4-204ENST00000414057 NUCB1Q02818 461 aa20.68■□□□□ 0.9
SCAMP4-204ENST00000414057 VGLL4Q14135 290 aa20.68■□□□□ 0.9
SCAMP4-204ENST00000414057 DIXDC1Q155Q3 683 aa20.68■□□□□ 0.9
SCAMP4-204ENST00000414057 TESPA1A2RU30 521 aaPredicted RBP20.67■□□□□ 0.9
SCAMP4-204ENST00000414057 DZIP1Q86YF9 867 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-204ENST00000414057 ABCF2Q9UG63 623 aa20.67■□□□□ 0.9
SCAMP4-204ENST00000414057 PNMA6EA0A0J9YXQ4 647 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 GJA5P36382 358 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 GTF2A2P52657 109 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 RASGRF1Q13972 1273 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 CDC42EP5Q6NZY7 148 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 WRNIP1Q96S55 665 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 ZNF341Q9BYN7 854 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 USP40Q9NVE5 1235 aa20.66■□□□□ 0.9
SCAMP4-204ENST00000414057 MYH13Q9UKX3 1938 aa20.65■□□□□ 0.9
SCAMP4-204ENST00000414057 IGF2BP3O00425 579 aaKnown RBP eCLIP20.65■□□□□ 0.9
SCAMP4-204ENST00000414057 RGS19P49795 217 aa20.65■□□□□ 0.9
SCAMP4-204ENST00000414057 WDHD1O75717 1129 aaPredicted RBP20.64■□□□□ 0.89
SCAMP4-204ENST00000414057 POLA2Q14181 598 aa20.64■□□□□ 0.89
SCAMP4-204ENST00000414057 CHD1LQ86WJ1 897 aa20.64■□□□□ 0.89
SCAMP4-204ENST00000414057 ERO1BQ86YB8 467 aa20.64■□□□□ 0.89
SCAMP4-204ENST00000414057 SPDYE5A6NIY4 337 aa20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 MLLT1Q03111 559 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 TCP10Q12799 353 aa20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 ERICH6Q7L0X2 663 aa20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 OTUD5Q96G74 571 aa20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 FAM163AQ96GL9 167 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-204ENST00000414057 MS4A4AQ96JQ5 239 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 GAKO14976 1311 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 CCL15-CCL14A0A0B4J2E2 113 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 ENTPD3O75355 529 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 UQCRFS1P1P0C7P4 283 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 CCL15Q16663 113 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 HSP90AB4PQ58FF6 505 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 FBXO46Q6PJ61 603 aaPredicted RBP20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 MIGA2Q7L4E1 593 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 SPATA5Q8NB90 893 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 ERO1AQ96HE7 468 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 IDI2Q9BXS1 227 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 R3HDMLQ9H3Y0 253 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 GPR108Q9NPR9 543 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 SNCAIPQ9Y6H5 919 aa20.62■□□□□ 0.89
SCAMP4-204ENST00000414057 LDHCP07864 332 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 CETPP11597 493 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 RGS3P49796 1198 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 GSTO1P78417 241 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 NFIAQ12857 509 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 CRHR2Q13324 411 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 ZKSCAN4Q969J2 545 aaPredicted RBP20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 PTPN18Q99952 460 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms