RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 TIMM10P62072 90 aa23.92■■□□□ 1.42
CPSF7-204ENST00000413232 NFIAQ12857 509 aa23.92■■□□□ 1.42
CPSF7-204ENST00000413232 CCL15Q16663 113 aa23.92■■□□□ 1.42
CPSF7-204ENST00000413232 FAM43AQ8N2R8 423 aa23.92■■□□□ 1.42
CPSF7-204ENST00000413232 WRNIP1Q96S55 665 aa23.92■■□□□ 1.42
CPSF7-204ENST00000413232 MKI67P46013 3256 aaKnown RBP23.92■■□□□ 1.42
CPSF7-204ENST00000413232 SPDYE5A6NIY4 337 aa23.91■■□□□ 1.42
CPSF7-204ENST00000413232 TCP10Q12799 353 aa23.91■■□□□ 1.42
CPSF7-204ENST00000413232 ZSWIM8A7E2V4 1837 aa23.91■■□□□ 1.42
CPSF7-204ENST00000413232 RPAP1Q9BWH6 1393 aaPredicted RBP23.91■■□□□ 1.42
CPSF7-204ENST00000413232 BRCA2P51587 3418 aa23.9■■□□□ 1.42
CPSF7-204ENST00000413232 BCAR3O75815 825 aa23.9■■□□□ 1.42
CPSF7-204ENST00000413232 GTF2A2P52657 109 aa23.9■■□□□ 1.42
CPSF7-204ENST00000413232 CCDC102BQ68D86 513 aa23.9■■□□□ 1.42
CPSF7-204ENST00000413232 FAM151AQ8WW52 585 aa23.9■■□□□ 1.42
CPSF7-204ENST00000413232 FAM198AQ9UFP1 575 aa23.9■■□□□ 1.42
CPSF7-204ENST00000413232 SALL1Q9NSC2 1324 aa23.89■■□□□ 1.42
CPSF7-204ENST00000413232 IRF6O14896 467 aa23.89■■□□□ 1.41
CPSF7-204ENST00000413232 LDHBP07195 334 aaKnown RBP23.89■■□□□ 1.41
CPSF7-204ENST00000413232 TRIM27P14373 513 aa23.89■■□□□ 1.41
CPSF7-204ENST00000413232 INPP5BP32019 993 aa23.89■■□□□ 1.41
CPSF7-204ENST00000413232 SP3Q02447 781 aa23.89■■□□□ 1.41
CPSF7-204ENST00000413232 ZFPM1Q8IX07 1006 aa23.89■■□□□ 1.41
CPSF7-204ENST00000413232 GNL3LQ9NVN8 582 aaKnown RBP23.89■■□□□ 1.41
CPSF7-204ENST00000413232 DENND2AQ9ULE3 1009 aa23.89■■□□□ 1.41
CPSF7-204ENST00000413232 SRGAP3O43295 1099 aa23.88■■□□□ 1.41
CPSF7-204ENST00000413232 ERO1BQ86YB8 467 aa23.88■■□□□ 1.41
CPSF7-204ENST00000413232 ERO1AQ96HE7 468 aa23.88■■□□□ 1.41
CPSF7-204ENST00000413232 HDAC5Q9UQL6 1122 aa23.88■■□□□ 1.41
CPSF7-204ENST00000413232 PTPN22Q9Y2R2 807 aa23.88■■□□□ 1.41
CPSF7-204ENST00000413232 TFCP2Q12800 502 aa23.87■■□□□ 1.41
CPSF7-204ENST00000413232 MTX1Q13505 466 aa23.87■■□□□ 1.41
CPSF7-204ENST00000413232 RASGRF1Q13972 1273 aa23.87■■□□□ 1.41
CPSF7-204ENST00000413232 TAF1CQ15572 869 aaPredicted RBP23.87■■□□□ 1.41
CPSF7-204ENST00000413232 USP40Q9NVE5 1235 aa23.87■■□□□ 1.41
CPSF7-204ENST00000413232 A0A1B0GUL7 405 aa23.86■■□□□ 1.41
CPSF7-204ENST00000413232 SEMA3EO15041 775 aa23.86■■□□□ 1.41
CPSF7-204ENST00000413232 ZBTB22O15209 634 aa23.86■■□□□ 1.41
CPSF7-204ENST00000413232 GNAI3P08754 354 aa23.86■■□□□ 1.41
CPSF7-204ENST00000413232 ZNF341Q9BYN7 854 aa23.86■■□□□ 1.41
CPSF7-204ENST00000413232 BTBD19C9JJ37 291 aa23.85■■□□□ 1.41
CPSF7-204ENST00000413232 DCAF15Q66K64 600 aa23.85■■□□□ 1.41
CPSF7-204ENST00000413232 FRAT1Q92837 279 aaPredicted RBP23.85■■□□□ 1.41
CPSF7-204ENST00000413232 CLUAP1Q96AJ1 413 aa23.85■■□□□ 1.41
CPSF7-204ENST00000413232 HOOK2Q96ED9 719 aa23.85■■□□□ 1.41
CPSF7-204ENST00000413232 XAGE2Q96GT9 111 aa23.85■■□□□ 1.41
CPSF7-204ENST00000413232 EFCC1Q9HA90 598 aa23.85■■□□□ 1.41
CPSF7-204ENST00000413232 ZNF112Q9UJU3 913 aa23.85■■□□□ 1.41
CPSF7-204ENST00000413232 DOCK2Q92608 1830 aa23.84■■□□□ 1.41
CPSF7-204ENST00000413232 PPIL2Q13356 520 aa23.84■■□□□ 1.41
CPSF7-204ENST00000413232 ATF7IPQ6VMQ6 1270 aa23.84■■□□□ 1.41
CPSF7-204ENST00000413232 ZFYVE28Q9HCC9 887 aa23.84■■□□□ 1.41
CPSF7-204ENST00000413232 PNMA6EA0A0J9YXQ4 647 aa23.83■■□□□ 1.41
CPSF7-204ENST00000413232 POTEFA5A3E0 1075 aa23.83■■□□□ 1.41
CPSF7-204ENST00000413232 SLURP2P0DP57 97 aa23.83■■□□□ 1.41
CPSF7-204ENST00000413232 CETPP11597 493 aa23.83■■□□□ 1.41
CPSF7-204ENST00000413232 GAKO14976 1311 aa23.83■■□□□ 1.4
CPSF7-204ENST00000413232 SNAPC2Q13487 334 aa23.82■■□□□ 1.4
CPSF7-204ENST00000413232 SH3BP5LQ7L8J4 393 aa23.82■■□□□ 1.4
CPSF7-204ENST00000413232 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.82■■□□□ 1.4
CPSF7-204ENST00000413232 ZNF384Q8TF68 577 aa23.82■■□□□ 1.4
CPSF7-204ENST00000413232 ABCF2Q9UG63 623 aa23.82■■□□□ 1.4
CPSF7-204ENST00000413232 RBBP6Q7Z6E9 1792 aaKnown RBP23.82■■□□□ 1.4
CPSF7-204ENST00000413232 ATRNL1Q5VV63 1379 aa23.81■■□□□ 1.4
CPSF7-204ENST00000413232 IPO8O15397 1037 aaKnown RBP23.81■■□□□ 1.4
CPSF7-204ENST00000413232 RGS3P49796 1198 aa23.81■■□□□ 1.4
CPSF7-204ENST00000413232 PPATQ06203 517 aa23.81■■□□□ 1.4
CPSF7-204ENST00000413232 ARHGAP39Q9C0H5 1083 aa23.81■■□□□ 1.4
CPSF7-204ENST00000413232 RFX7Q2KHR2 1363 aa23.8■■□□□ 1.4
CPSF7-204ENST00000413232 TLR2O60603 784 aa23.8■■□□□ 1.4
CPSF7-204ENST00000413232 GNAI2P04899 355 aa23.8■■□□□ 1.4
CPSF7-204ENST00000413232 PI16Q6UXB8 463 aa23.8■■□□□ 1.4
CPSF7-204ENST00000413232 IDI2Q9BXS1 227 aa23.8■■□□□ 1.4
CPSF7-204ENST00000413232 DDX4Q9NQI0 724 aaKnown RBP23.8■■□□□ 1.4
CPSF7-204ENST00000413232 AKAP2Q9Y2D5 859 aa23.8■■□□□ 1.4
CPSF7-204ENST00000413232 PDS5AQ29RF7 1337 aaKnown RBP23.8■■□□□ 1.4
CPSF7-204ENST00000413232 SLC34A2O95436 690 aa23.79■■□□□ 1.4
CPSF7-204ENST00000413232 MOGSQ13724 837 aa23.79■■□□□ 1.4
CPSF7-204ENST00000413232 ZGPATQ8N5A5 531 aaKnown RBP23.79■■□□□ 1.4
CPSF7-204ENST00000413232 TMEM57Q8N5G2 664 aa23.79■■□□□ 1.4
CPSF7-204ENST00000413232 ARMC5Q96C12 935 aa23.79■■□□□ 1.4
CPSF7-204ENST00000413232 FAM163AQ96GL9 167 aaPredicted RBP23.79■■□□□ 1.4
CPSF7-204ENST00000413232 NEUROD6Q96NK8 337 aa23.79■■□□□ 1.4
CPSF7-204ENST00000413232 MYO5AQ9Y4I1 1855 aaKnown RBP23.79■■□□□ 1.4
CPSF7-204ENST00000413232 PTPRFP10586 1907 aa23.78■■□□□ 1.4
CPSF7-204ENST00000413232 PHIPQ8WWQ0 1821 aa23.78■■□□□ 1.4
CPSF7-204ENST00000413232 PHF20L1A8MW92 1017 aa23.78■■□□□ 1.4
CPSF7-204ENST00000413232 WDHD1O75717 1129 aaPredicted RBP23.78■■□□□ 1.4
CPSF7-204ENST00000413232 NOL9Q5SY16 702 aaKnown RBP23.78■■□□□ 1.4
CPSF7-204ENST00000413232 DZIP1Q86YF9 867 aaKnown RBP23.78■■□□□ 1.4
CPSF7-204ENST00000413232 ZCCHC17Q9NP64 241 aaKnown RBP23.78■■□□□ 1.4
CPSF7-204ENST00000413232 HMG20BQ9P0W2 317 aa23.78■■□□□ 1.4
CPSF7-204ENST00000413232 KCNH4Q9UQ05 1017 aa23.78■■□□□ 1.4
CPSF7-204ENST00000413232 PTCH2Q9Y6C5 1203 aa23.78■■□□□ 1.4
CPSF7-204ENST00000413232 DDTLA6NHG4 134 aaPredicted RBP23.77■■□□□ 1.4
CPSF7-204ENST00000413232 MECOMQ03112 1051 aa23.77■■□□□ 1.4
CPSF7-204ENST00000413232 MVPQ14764 893 aaKnown RBP23.77■■□□□ 1.4
CPSF7-204ENST00000413232 TBC1D9Q6ZT07 1266 aa23.77■■□□□ 1.4
CPSF7-204ENST00000413232 MIER1Q8N108 512 aa23.77■■□□□ 1.4
CPSF7-204ENST00000413232 ENTPD3O75355 529 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms