RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 VPS37DQ86XT2 251 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 NBPF15Q8N660 670 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 ALG1Q9BT22 464 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 UTP14AQ9BVJ6 771 aaKnown RBP20.3■□□□□ 0.84
SDCBP-202ENST00000413219 URI1O94763 535 aaPredicted RBP20.3■□□□□ 0.84
SDCBP-202ENST00000413219 ZC3H6P61129 1189 aaKnown RBP20.3■□□□□ 0.84
SDCBP-202ENST00000413219 TMEM139Q8IV31 216 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 ZNF594Q96JF6 807 aaPredicted RBP20.3■□□□□ 0.84
SDCBP-202ENST00000413219 C19orf44Q9H6X5 657 aa20.3■□□□□ 0.84
SDCBP-202ENST00000413219 ALS2Q96Q42 1657 aa20.29■□□□□ 0.84
SDCBP-202ENST00000413219 PARP4Q9UKK3 1724 aaKnown RBP20.29■□□□□ 0.84
SDCBP-202ENST00000413219 TBX2Q13207 712 aaPredicted RBP20.29■□□□□ 0.84
SDCBP-202ENST00000413219 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
SDCBP-202ENST00000413219 CPLX2Q6PUV4 134 aaKnown RBP20.29■□□□□ 0.84
SDCBP-202ENST00000413219 MAP3K14Q99558 947 aa20.29■□□□□ 0.84
SDCBP-202ENST00000413219 ANGEL1Q9UNK9 670 aaKnown RBP20.29■□□□□ 0.84
SDCBP-202ENST00000413219 PPP2R2CQ9Y2T4 447 aa20.29■□□□□ 0.84
SDCBP-202ENST00000413219 VWA3AA6NCI4 1184 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 PNOCQ13519 176 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 TEX35Q5T0J7 233 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 CCDC102BQ68D86 513 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 KRT40Q6A162 431 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 ISM2Q6H9L7 571 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 TRDNQ13061 729 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 KRBA2Q6ZNG9 492 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 METTL16Q86W50 562 aaKnown RBP20.28■□□□□ 0.84
SDCBP-202ENST00000413219 XAGE2Q96GT9 111 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 CARD6Q9BX69 1037 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 PUS3Q9BZE2 481 aaKnown RBP20.28■□□□□ 0.84
SDCBP-202ENST00000413219 UBXN6Q9BZV1 441 aa20.28■□□□□ 0.84
SDCBP-202ENST00000413219 FANCGO15287 622 aa20.27■□□□□ 0.84
SDCBP-202ENST00000413219 STX10O60499 249 aa20.27■□□□□ 0.84
SDCBP-202ENST00000413219 GPR161Q8N6U8 529 aaKnown RBP20.27■□□□□ 0.84
SDCBP-202ENST00000413219 PUS7LQ9H0K6 701 aaKnown RBP20.27■□□□□ 0.84
SDCBP-202ENST00000413219 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.27■□□□□ 0.84
SDCBP-202ENST00000413219 HOOK1Q9UJC3 728 aaKnown RBP20.27■□□□□ 0.84
SDCBP-202ENST00000413219 ZNF142P52746 1687 aaPredicted RBP20.27■□□□□ 0.83
SDCBP-202ENST00000413219 GPAA1O43292 621 aa20.26■□□□□ 0.83
SDCBP-202ENST00000413219 METAP2P50579 478 aaKnown RBP eCLIP20.26■□□□□ 0.83
SDCBP-202ENST00000413219 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
SDCBP-202ENST00000413219 FANCLQ9NW38 375 aa20.26■□□□□ 0.83
SDCBP-202ENST00000413219 COL18A1P39060 1754 aa20.26■□□□□ 0.83
SDCBP-202ENST00000413219 TMEM232C9JQI7 657 aa20.26■□□□□ 0.83
SDCBP-202ENST00000413219 SH2B2O14492 632 aaPredicted RBP20.26■□□□□ 0.83
SDCBP-202ENST00000413219 RAB11FIP4Q86YS3 637 aa20.26■□□□□ 0.83
SDCBP-202ENST00000413219 PODXL2Q9NZ53 605 aa20.26■□□□□ 0.83
SDCBP-202ENST00000413219 CASQ1P31415 396 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 GNL2Q13823 731 aaKnown RBP20.25■□□□□ 0.83
SDCBP-202ENST00000413219 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 CNNM3Q8NE01 707 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 BAG1Q99933 345 aaPredicted RBP20.25■□□□□ 0.83
SDCBP-202ENST00000413219 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.25■□□□□ 0.83
SDCBP-202ENST00000413219 INTS13Q9NVM9 706 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 KCNH3Q9ULD8 1083 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 ATRNO75882 1429 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 ADORA1P30542 326 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 ZAP70P43403 619 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 PCDHA5Q9Y5H7 936 aa20.25■□□□□ 0.83
SDCBP-202ENST00000413219 ERICH4A6NGS2 130 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 MDM2Q00987 491 aaPredicted RBP20.24■□□□□ 0.83
SDCBP-202ENST00000413219 TRIM29Q14134 588 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 LONRF3Q496Y0 759 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 APOA5Q6Q788 366 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 TMEM87BQ96K49 555 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 AIFM3Q96NN9 605 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 DACH1Q9UI36 760 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 MRFAP1Q9Y605 127 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 C1orf167Q5SNV9 1468 aa20.24■□□□□ 0.83
SDCBP-202ENST00000413219 RSRC2Q7L4I2 434 aaKnown RBP20.23■□□□□ 0.83
SDCBP-202ENST00000413219 FOXP4Q8IVH2 680 aaPredicted RBP20.23■□□□□ 0.83
SDCBP-202ENST00000413219 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
SDCBP-202ENST00000413219 STK36Q9NRP7 1315 aa20.23■□□□□ 0.83
SDCBP-202ENST00000413219 CSB-PGBD3P0DP91 1061 aa20.23■□□□□ 0.83
SDCBP-202ENST00000413219 SCARF1Q14162 830 aa20.23■□□□□ 0.83
SDCBP-202ENST00000413219 CC2D1AQ6P1N0 951 aaPredicted RBP20.23■□□□□ 0.83
SDCBP-202ENST00000413219 KRI1Q8N9T8 703 aaKnown RBP20.23■□□□□ 0.83
SDCBP-202ENST00000413219 MLKLQ8NB16 471 aa20.23■□□□□ 0.83
SDCBP-202ENST00000413219 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.23■□□□□ 0.83
SDCBP-202ENST00000413219 MYH7P12883 1935 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 ZNF18P17022 549 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 GNG11P61952 73 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 NT5DC1Q5TFE4 455 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 JAKMIP3Q5VZ66 844 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 SPECC1LQ69YQ0 1117 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 ENOX1Q8TC92 643 aaKnown RBP20.22■□□□□ 0.83
SDCBP-202ENST00000413219 RABGGTAQ92696 567 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 CLIC6Q96NY7 704 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 TBC1D8O95759 1140 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 IARSP41252 1262 aaKnown RBP20.22■□□□□ 0.83
SDCBP-202ENST00000413219 PPP2R3AQ06190 1150 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 NTRK3Q16288 839 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 CYB5R4Q7L1T6 521 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 TC2NQ8N9U0 490 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
SDCBP-202ENST00000413219 UBR2Q8IWV8 1755 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 ADAMTSL3P82987 1691 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 BMP6P22004 513 aa20.21■□□□□ 0.83
SDCBP-202ENST00000413219 CDC27P30260 824 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms