RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 AKAP2Q9Y2D5 859 aa27.65■■■□□ 2.02
MSH6-202ENST00000411819 A0A1B0GUL7 405 aa27.64■■■□□ 2.02
MSH6-202ENST00000411819 RGS19P49795 217 aa27.64■■■□□ 2.02
MSH6-202ENST00000411819 SOX10P56693 466 aa27.64■■■□□ 2.02
MSH6-202ENST00000411819 OTUD5Q96G74 571 aa27.64■■■□□ 2.02
MSH6-202ENST00000411819 HPS5Q9UPZ3 1129 aa27.64■■■□□ 2.02
MSH6-202ENST00000411819 MYH2Q9UKX2 1941 aa27.64■■■□□ 2.02
MSH6-202ENST00000411819 RASGRF1Q13972 1273 aa27.63■■■□□ 2.01
MSH6-202ENST00000411819 DCAF15Q66K64 600 aa27.63■■■□□ 2.01
MSH6-202ENST00000411819 CDC42EP5Q6NZY7 148 aa27.63■■■□□ 2.01
MSH6-202ENST00000411819 ZGPATQ8N5A5 531 aaKnown RBP27.63■■■□□ 2.01
MSH6-202ENST00000411819 TMEM57Q8N5G2 664 aa27.63■■■□□ 2.01
MSH6-202ENST00000411819 TCP10Q12799 353 aa27.62■■■□□ 2.01
MSH6-202ENST00000411819 XAGE2Q96GT9 111 aa27.62■■■□□ 2.01
MSH6-202ENST00000411819 ABCF2Q9UG63 623 aa27.62■■■□□ 2.01
MSH6-202ENST00000411819 PNMA6EA0A0J9YXQ4 647 aa27.61■■■□□ 2.01
MSH6-202ENST00000411819 CRHR2Q13324 411 aa27.61■■■□□ 2.01
MSH6-202ENST00000411819 MVPQ14764 893 aaKnown RBP27.61■■■□□ 2.01
MSH6-202ENST00000411819 DZIP1Q86YF9 867 aaKnown RBP27.61■■■□□ 2.01
MSH6-202ENST00000411819 FAM151AQ8WW52 585 aa27.61■■■□□ 2.01
MSH6-202ENST00000411819 NEUROD6Q96NK8 337 aa27.61■■■□□ 2.01
MSH6-202ENST00000411819 PTPN18Q99952 460 aa27.61■■■□□ 2.01
MSH6-202ENST00000411819 SNCAIPQ9Y6H5 919 aa27.61■■■□□ 2.01
MSH6-202ENST00000411819 CCL15-CCL14A0A0B4J2E2 113 aa27.6■■■□□ 2.01
MSH6-202ENST00000411819 TESPA1A2RU30 521 aaPredicted RBP27.6■■■□□ 2.01
MSH6-202ENST00000411819 GTF2A2P52657 109 aa27.6■■■□□ 2.01
MSH6-202ENST00000411819 NFIAQ12857 509 aa27.6■■■□□ 2.01
MSH6-202ENST00000411819 CCL15Q16663 113 aa27.6■■■□□ 2.01
MSH6-202ENST00000411819 ZKSCAN4Q969J2 545 aaPredicted RBP27.6■■■□□ 2.01
MSH6-202ENST00000411819 USP40Q9NVE5 1235 aa27.6■■■□□ 2.01
MSH6-202ENST00000411819 SPDYE5A6NIY4 337 aa27.59■■■□□ 2.01
MSH6-202ENST00000411819 G3BP1Q13283 466 aaKnown RBP eCLIP27.59■■■□□ 2.012e-6■■■■□ 24.5
MSH6-202ENST00000411819 FBXO46Q6PJ61 603 aaPredicted RBP27.59■■■□□ 2.01
MSH6-202ENST00000411819 MIGA2Q7L4E1 593 aa27.59■■■□□ 2.01
MSH6-202ENST00000411819 FTSJ3Q8IY81 847 aaKnown RBP27.59■■■□□ 2.01
MSH6-202ENST00000411819 BRI3BPQ8WY22 251 aa27.59■■■□□ 2.01
MSH6-202ENST00000411819 MS4A4AQ96JQ5 239 aa27.59■■■□□ 2.01
MSH6-202ENST00000411819 ZNF341Q9BYN7 854 aa27.59■■■□□ 2.01
MSH6-202ENST00000411819 GORABQ5T7V8 394 aa27.58■■■□□ 2.01
MSH6-202ENST00000411819 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.58■■■□□ 2.01
MSH6-202ENST00000411819 PDS5AQ29RF7 1337 aaKnown RBP27.58■■■□□ 2.01
MSH6-202ENST00000411819 DOCK2Q92608 1830 aa27.57■■■□□ 2
MSH6-202ENST00000411819 ZBTB22O15209 634 aa27.57■■■□□ 2
MSH6-202ENST00000411819 ERO1BQ86YB8 467 aa27.57■■■□□ 2
MSH6-202ENST00000411819 TRIM17Q9Y577 477 aa27.57■■■□□ 2
MSH6-202ENST00000411819 TAF1CQ15572 869 aaPredicted RBP27.56■■■□□ 2
MSH6-202ENST00000411819 ERO1AQ96HE7 468 aa27.56■■■□□ 2
MSH6-202ENST00000411819 SPTY2D1Q68D10 685 aaPredicted RBP27.55■■■□□ 2
MSH6-202ENST00000411819 ITPRIPQ8IWB1 547 aa27.55■■■□□ 2
MSH6-202ENST00000411819 SLF2Q8IX21 1173 aa27.55■■■□□ 2
MSH6-202ENST00000411819 CD99L2Q8TCZ2 262 aa27.55■■■□□ 2
MSH6-202ENST00000411819 FAM198AQ9UFP1 575 aa27.55■■■□□ 2
MSH6-202ENST00000411819 GAKO14976 1311 aa27.54■■■□□ 2
MSH6-202ENST00000411819 INPP5BP32019 993 aa27.54■■■□□ 2
MSH6-202ENST00000411819 OTOP1Q7RTM1 612 aa27.54■■■□□ 2
MSH6-202ENST00000411819 C1orf115Q9H7X2 142 aa27.54■■■□□ 2
MSH6-202ENST00000411819 CETPP11597 493 aa27.53■■■□□ 2
MSH6-202ENST00000411819 OS9Q13438 667 aaPredicted RBP27.53■■■□□ 2
MSH6-202ENST00000411819 ERICH6Q7L0X2 663 aa27.53■■■□□ 2
MSH6-202ENST00000411819 FAM43AQ8N2R8 423 aa27.53■■■□□ 2
MSH6-202ENST00000411819 ZBED9Q6R2W3 1325 aa27.52■■■□□ 2
MSH6-202ENST00000411819 IRF6O14896 467 aa27.52■■■□□ 2
MSH6-202ENST00000411819 BTDP43251 543 aa27.52■■■□□ 2
MSH6-202ENST00000411819 RGS3P49796 1198 aa27.52■■■□□ 2
MSH6-202ENST00000411819 SP3Q02447 781 aa27.52■■■□□ 2
MSH6-202ENST00000411819 PPIL2Q13356 520 aa27.52■■■□□ 2
MSH6-202ENST00000411819 SNAPC2Q13487 334 aa27.52■■■□□ 2
MSH6-202ENST00000411819 ZFYVE28Q9HCC9 887 aa27.52■■■□□ 2
MSH6-202ENST00000411819 HMG20BQ9P0W2 317 aa27.52■■■□□ 2
MSH6-202ENST00000411819 MROH7-TTC4A0A0A0MT08 1334 aa27.51■■□□□ 1.99
MSH6-202ENST00000411819 PI16Q6UXB8 463 aa27.51■■□□□ 1.99
MSH6-202ENST00000411819 ZSCAN29Q8IWY8 852 aaPredicted RBP27.51■■□□□ 1.99
MSH6-202ENST00000411819 ZFPM1Q8IX07 1006 aa27.51■■□□□ 1.99
MSH6-202ENST00000411819 SPATA5Q8NB90 893 aa27.51■■□□□ 1.99
MSH6-202ENST00000411819 WDHD1O75717 1129 aaPredicted RBP27.5■■□□□ 1.99
MSH6-202ENST00000411819 MECOMQ03112 1051 aa27.5■■□□□ 1.99
MSH6-202ENST00000411819 PICALMQ13492 652 aa27.5■■□□□ 1.99
MSH6-202ENST00000411819 IDI2Q9BXS1 227 aa27.5■■□□□ 1.99
MSH6-202ENST00000411819 RFX7Q2KHR2 1363 aa27.49■■□□□ 1.99
MSH6-202ENST00000411819 ENTPD3O75355 529 aa27.49■■□□□ 1.99
MSH6-202ENST00000411819 ARID4AP29374 1257 aaPredicted RBP27.49■■□□□ 1.99
MSH6-202ENST00000411819 PPATQ06203 517 aa27.49■■□□□ 1.99
MSH6-202ENST00000411819 POLA2Q14181 598 aa27.49■■□□□ 1.99
MSH6-202ENST00000411819 RLBP1P12271 317 aa27.48■■□□□ 1.99
MSH6-202ENST00000411819 EFCC1Q9HA90 598 aa27.48■■□□□ 1.99
MSH6-202ENST00000411819 ZNF112Q9UJU3 913 aa27.48■■□□□ 1.99
MSH6-202ENST00000411819 BTBD19C9JJ37 291 aa27.47■■□□□ 1.99
MSH6-202ENST00000411819 UQCRFS1P1P0C7P4 283 aa27.47■■□□□ 1.99
MSH6-202ENST00000411819 ATP8B2P98198 1209 aa27.47■■□□□ 1.99
MSH6-202ENST00000411819 TBC1D9Q6ZT07 1266 aa27.47■■□□□ 1.99
MSH6-202ENST00000411819 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.47■■□□□ 1.99
MSH6-202ENST00000411819 SSH3Q8TE77 659 aa27.47■■□□□ 1.99
MSH6-202ENST00000411819 FAM163AQ96GL9 167 aaPredicted RBP27.47■■□□□ 1.99
MSH6-202ENST00000411819 RAI14Q9P0K7 980 aa27.47■■□□□ 1.99
MSH6-202ENST00000411819 SURF6O75683 361 aaKnown RBP27.46■■□□□ 1.99
MSH6-202ENST00000411819 MCAMP43121 646 aa27.46■■□□□ 1.99
MSH6-202ENST00000411819 TNNI3KQ59H18 835 aa27.46■■□□□ 1.99
MSH6-202ENST00000411819 DDX4Q9NQI0 724 aaKnown RBP27.46■■□□□ 1.99
MSH6-202ENST00000411819 FPGT-TNNI3KV9GXZ4 949 aa27.46■■□□□ 1.99
MSH6-202ENST00000411819 ATRNL1Q5VV63 1379 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms