RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 NAP1L2Q9ULW6 460 aaPredicted RBP27.73■■■□□ 2.03
PMS1-205ENST00000409985 FGFR2P21802 821 aa27.72■■■□□ 2.03
PMS1-205ENST00000409985 PUM3Q15397 648 aaKnown RBP27.72■■■□□ 2.03
PMS1-205ENST00000409985 COL23A1Q86Y22 540 aaPredicted RBP27.72■■■□□ 2.03
PMS1-205ENST00000409985 PDCL3Q9H2J4 239 aa27.72■■■□□ 2.03
PMS1-205ENST00000409985 BCORQ6W2J9 1755 aa27.72■■■□□ 2.03
PMS1-205ENST00000409985 GPTP24298 496 aa27.72■■■□□ 2.03
PMS1-205ENST00000409985 TRAPPC3LQ5T215 181 aa27.72■■■□□ 2.03
PMS1-205ENST00000409985 SLC9C2Q5TAH2 1124 aa27.72■■■□□ 2.03
PMS1-205ENST00000409985 MTERF4Q7Z6M4 381 aaKnown RBP27.72■■■□□ 2.03
PMS1-205ENST00000409985 CCDC85AQ96PX6 553 aaPredicted RBP27.72■■■□□ 2.03
PMS1-205ENST00000409985 GOLGA8BA8MQT2 603 aa27.71■■■□□ 2.03
PMS1-205ENST00000409985 HAND2P61296 217 aa27.71■■■□□ 2.03
PMS1-205ENST00000409985 IQCB1Q15051 598 aa27.71■■■□□ 2.03
PMS1-205ENST00000409985 MYRIPQ8NFW9 859 aa27.71■■■□□ 2.03
PMS1-205ENST00000409985 KCNF1Q9H3M0 494 aa27.71■■■□□ 2.03
PMS1-205ENST00000409985 ORC3Q9UBD5 711 aaPredicted RBP27.71■■■□□ 2.03
PMS1-205ENST00000409985 CDKL5O76039 1030 aa27.7■■■□□ 2.03
PMS1-205ENST00000409985 SYNE4Q8N205 404 aa27.7■■■□□ 2.03
PMS1-205ENST00000409985 MRPS27Q92552 414 aaKnown RBP27.7■■■□□ 2.03
PMS1-205ENST00000409985 TMEM87BQ96K49 555 aa27.7■■■□□ 2.03
PMS1-205ENST00000409985 DNAJC25Q9H1X3 360 aa27.7■■■□□ 2.03
PMS1-205ENST00000409985 ANO10Q9NW15 660 aa27.7■■■□□ 2.03
PMS1-205ENST00000409985 ANGEL1Q9UNK9 670 aaKnown RBP27.7■■■□□ 2.03
PMS1-205ENST00000409985 SCN7AQ01118 1682 aa27.7■■■□□ 2.02
PMS1-205ENST00000409985 CPLX1O14810 134 aa27.7■■■□□ 2.02
PMS1-205ENST00000409985 ME1P48163 572 aa27.7■■■□□ 2.02
PMS1-205ENST00000409985 CCDC102BQ68D86 513 aa27.7■■■□□ 2.02
PMS1-205ENST00000409985 LINC00301Q8NCQ3 95 aa27.7■■■□□ 2.02
PMS1-205ENST00000409985 GOLPH3LQ9H4A5 285 aa27.7■■■□□ 2.02
PMS1-205ENST00000409985 GTF2F1P35269 517 aaKnown RBP eCLIP27.69■■■□□ 2.02
PMS1-205ENST00000409985 NARFQ9UHQ1 456 aa27.69■■■□□ 2.02
PMS1-205ENST00000409985 TCRBV5S4A2TA0A5A2 114 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 ADRA2BP18089 450 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 CEBPZQ03701 1054 aaKnown RBP27.68■■■□□ 2.02
PMS1-205ENST00000409985 DNTTIP2Q5QJE6 756 aaKnown RBP27.68■■■□□ 2.02
PMS1-205ENST00000409985 PI16Q6UXB8 463 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 FMR1NBQ8N0W7 255 aaPredicted RBP27.68■■■□□ 2.02
PMS1-205ENST00000409985 FSIP1Q8NA03 581 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 TRIM5Q9C035 493 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 STK32BQ9NY57 414 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 RTL9Q8NET4 1388 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 MRFAP1L1Q96HT8 127 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 PIH1D3Q9NQM4 214 aaKnown RBP27.68■■■□□ 2.02
PMS1-205ENST00000409985 PCDHA7Q9UN72 937 aa27.68■■■□□ 2.02
PMS1-205ENST00000409985 GOLGA6L19H0YKK7 550 aa27.67■■■□□ 2.02
PMS1-205ENST00000409985 PDE6AP16499 860 aa27.67■■■□□ 2.02
PMS1-205ENST00000409985 NBPF3Q9H094 633 aa27.67■■■□□ 2.02
PMS1-205ENST00000409985 GPHNQ9NQX3 736 aaPredicted RBP27.67■■■□□ 2.02
PMS1-205ENST00000409985 QSER1Q2KHR3 1735 aa27.67■■■□□ 2.02
PMS1-205ENST00000409985 DOCK2Q92608 1830 aa27.67■■■□□ 2.02
PMS1-205ENST00000409985 RFC4P35249 363 aa27.66■■■□□ 2.02
PMS1-205ENST00000409985 MYSM1Q5VVJ2 828 aa27.66■■■□□ 2.02
PMS1-205ENST00000409985 CPLX2Q6PUV4 134 aaKnown RBP27.66■■■□□ 2.02
PMS1-205ENST00000409985 UBN2Q6ZU65 1347 aa27.66■■■□□ 2.02
PMS1-205ENST00000409985 ZNF532Q9HCE3 1301 aa27.66■■■□□ 2.02
PMS1-205ENST00000409985 SH2B2O14492 632 aaPredicted RBP27.66■■■□□ 2.02
PMS1-205ENST00000409985 SLC5A1P13866 664 aa27.66■■■□□ 2.02
PMS1-205ENST00000409985 STRBPQ96SI9 672 aaKnown RBP27.66■■■□□ 2.02
PMS1-205ENST00000409985 FTOQ9C0B1 505 aaKnown RBP eCLIP27.66■■■□□ 2.02
PMS1-205ENST00000409985 NAT10Q9H0A0 1025 aaKnown RBP27.66■■■□□ 2.02
PMS1-205ENST00000409985 SGMS1Q86VZ5 419 aa27.65■■■□□ 2.02
PMS1-205ENST00000409985 SPC24Q8NBT2 197 aa27.65■■■□□ 2.02
PMS1-205ENST00000409985 NEMFO60524 1076 aa27.64■■■□□ 2.02
PMS1-205ENST00000409985 PHKA1P46020 1223 aa27.64■■■□□ 2.02
PMS1-205ENST00000409985 GUCY1B3Q02153 619 aa27.64■■■□□ 2.02
PMS1-205ENST00000409985 STK38Q15208 465 aa27.64■■■□□ 2.02
PMS1-205ENST00000409985 PARP10Q53GL7 1025 aa27.64■■■□□ 2.02
PMS1-205ENST00000409985 MPNDQ8N594 471 aa27.64■■■□□ 2.02
PMS1-205ENST00000409985 MTA3Q9BTC8 594 aa27.64■■■□□ 2.02
PMS1-205ENST00000409985 PATL2C9JE40 543 aaKnown RBP27.64■■■□□ 2.01
PMS1-205ENST00000409985 GYS1P13807 737 aa27.64■■■□□ 2.01
PMS1-205ENST00000409985 HMGB2P26583 209 aaKnown RBP27.64■■■□□ 2.01
PMS1-205ENST00000409985 BPIFA3Q9BQP9 254 aa27.64■■■□□ 2.01
PMS1-205ENST00000409985 SPTLC2O15270 562 aa27.63■■■□□ 2.01
PMS1-205ENST00000409985 IDH1O75874 414 aaKnown RBP27.63■■■□□ 2.01
PMS1-205ENST00000409985 LIFRP42702 1097 aa27.63■■■□□ 2.01
PMS1-205ENST00000409985 FOSBP53539 338 aa27.63■■■□□ 2.01
PMS1-205ENST00000409985 KIF23Q02241 960 aaPredicted RBP27.63■■■□□ 2.01
PMS1-205ENST00000409985 MAP3K12Q12852 859 aa27.63■■■□□ 2.01
PMS1-205ENST00000409985 SYNE3Q6ZMZ3 975 aa27.63■■■□□ 2.01
PMS1-205ENST00000409985 PYCARDQ9ULZ3 195 aa27.63■■■□□ 2.01
PMS1-205ENST00000409985 NID2Q14112 1375 aa27.62■■■□□ 2.01
PMS1-205ENST00000409985 TIAM2Q8IVF5 1701 aa27.62■■■□□ 2.01
PMS1-205ENST00000409985 SRCAPQ6ZRS2 3230 aa27.62■■■□□ 2.01
PMS1-205ENST00000409985 TBC1D10CQ8IV04 446 aa27.62■■■□□ 2.01
PMS1-205ENST00000409985 CEP57L1Q8IYX8 460 aa27.62■■■□□ 2.01
PMS1-205ENST00000409985 SPATA5Q8NB90 893 aa27.62■■■□□ 2.01
PMS1-205ENST00000409985 ZPR1O75312 459 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 PTGS1P23219 599 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 SF3A1Q15459 793 aaKnown RBP27.61■■■□□ 2.01
PMS1-205ENST00000409985 CCDC186Q7Z3E2 898 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 AIDAQ96BJ3 306 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 CNNM2Q9H8M5 875 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 GNAT2P19087 354 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 METAP2P50579 478 aaKnown RBP eCLIP27.61■■■□□ 2.01
PMS1-205ENST00000409985 TBC1D9BQ66K14 1250 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 DRC7Q8IY82 874 aa27.61■■■□□ 2.01
PMS1-205ENST00000409985 LAMB2P55268 1798 aa27.6■■■□□ 2.01
PMS1-205ENST00000409985 CMA1P23946 247 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms