RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 TFIP11Q9UBB9 837 aaKnown RBP23.14■■□□□ 1.3
LIMS2-207ENST00000409808 ZNF804BA4D1E1 1349 aa23.14■■□□□ 1.29
LIMS2-207ENST00000409808 H3BQV1 296 aa23.14■■□□□ 1.29
LIMS2-207ENST00000409808 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
LIMS2-207ENST00000409808 CRY2Q49AN0 593 aa23.14■■□□□ 1.29
LIMS2-207ENST00000409808 IFFO2Q5TF58 517 aa23.14■■□□□ 1.29
LIMS2-207ENST00000409808 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.14■■□□□ 1.29
LIMS2-207ENST00000409808 TXNRD3Q86VQ6 643 aa23.14■■□□□ 1.29
LIMS2-207ENST00000409808 VPS37DQ86XT2 251 aa23.14■■□□□ 1.29
LIMS2-207ENST00000409808 ANKRD2Q9GZV1 360 aa23.14■■□□□ 1.29
LIMS2-207ENST00000409808 GPAA1O43292 621 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 PFKFB2O60825 505 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 CAVIN4Q5BKX8 364 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 ATL3Q6DD88 541 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 ZSCAN25Q6NSZ9 544 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 MPNDQ8N594 471 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 MAGEB6Q8N7X4 407 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 BRF1Q92994 677 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 DOCK2Q92608 1830 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 COL1A1P02452 1464 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-207ENST00000409808 TCRBV5S4A2TA0A5A2 114 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 CAMK4Q16566 473 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 NAA16Q6N069 864 aaPredicted RBP23.13■■□□□ 1.29
LIMS2-207ENST00000409808 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
LIMS2-207ENST00000409808 DHX32Q7L7V1 743 aaKnown RBP23.12■■□□□ 1.29
LIMS2-207ENST00000409808 ANKIB1Q9P2G1 1089 aa23.12■■□□□ 1.29
LIMS2-207ENST00000409808 UBE3CQ15386 1083 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 STOX1Q6ZVD7 989 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 TDRD7Q8NHU6 1098 aaKnown RBP23.11■■□□□ 1.29
LIMS2-207ENST00000409808 CAMKK2Q96RR4 588 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 ANO6Q4KMQ2 910 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 FBXO33Q7Z6M2 555 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 BICD2Q8TD16 824 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 GPR101Q96P66 508 aaPredicted RBP23.11■■□□□ 1.29
LIMS2-207ENST00000409808 KCNF1Q9H3M0 494 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 CBX8Q9HC52 389 aa23.11■■□□□ 1.29
LIMS2-207ENST00000409808 CTAGE5O15320 804 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 JAK2O60674 1132 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 MMP10P09238 476 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 MAP3K12Q12852 859 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 PGBD1Q96JS3 809 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 GNL3LQ9NVN8 582 aaKnown RBP23.1■■□□□ 1.29
LIMS2-207ENST00000409808 LRP2BPQ9P2M1 347 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 ABCF2Q9UG63 623 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 ANKRD31Q8N7Z5 1873 aa23.1■■□□□ 1.29
LIMS2-207ENST00000409808 FGD1P98174 961 aa23.09■■□□□ 1.29
LIMS2-207ENST00000409808 CHAF1AQ13111 956 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-207ENST00000409808 FLAD1Q8NFF5 587 aa23.09■■□□□ 1.29
LIMS2-207ENST00000409808 RBM17Q96I25 401 aaKnown RBP23.09■■□□□ 1.29
LIMS2-207ENST00000409808 AGXT2Q9BYV1 514 aa23.09■■□□□ 1.29
LIMS2-207ENST00000409808 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
LIMS2-207ENST00000409808 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
LIMS2-207ENST00000409808 LUZP1Q86V48 1076 aa23.09■■□□□ 1.29
LIMS2-207ENST00000409808 CKAP2LQ8IYA6 745 aa23.09■■□□□ 1.29
LIMS2-207ENST00000409808 FGAP02671 866 aa23.08■■□□□ 1.29
LIMS2-207ENST00000409808 HAND2P61296 217 aa23.08■■□□□ 1.29
LIMS2-207ENST00000409808 SCRN1Q12765 414 aa23.08■■□□□ 1.29
LIMS2-207ENST00000409808 RCOR1Q9UKL0 485 aa23.08■■□□□ 1.29
LIMS2-207ENST00000409808 HIBADHP31937 336 aaKnown RBP23.08■■□□□ 1.28
LIMS2-207ENST00000409808 SPC24Q8NBT2 197 aa23.08■■□□□ 1.28
LIMS2-207ENST00000409808 JAG2Q9Y219 1238 aa23.08■■□□□ 1.28
LIMS2-207ENST00000409808 LAMA4Q16363 1823 aa23.08■■□□□ 1.28
LIMS2-207ENST00000409808 NR1I2O75469 434 aa23.07■■□□□ 1.28
LIMS2-207ENST00000409808 GPSM2P81274 684 aa23.07■■□□□ 1.28
LIMS2-207ENST00000409808 EXOSC10Q01780 885 aaKnown RBP23.07■■□□□ 1.28
LIMS2-207ENST00000409808 PLA2G4DQ86XP0 818 aa23.07■■□□□ 1.28
LIMS2-207ENST00000409808 IRS2Q9Y4H2 1338 aa23.07■■□□□ 1.28
LIMS2-207ENST00000409808 PYCARDQ9ULZ3 195 aa23.07■■□□□ 1.28
LIMS2-207ENST00000409808 KLRG2A4D1S0 409 aaPredicted RBP23.06■■□□□ 1.28
LIMS2-207ENST00000409808 ZNF165P49910 485 aa23.06■■□□□ 1.28
LIMS2-207ENST00000409808 SLC15A2Q16348 729 aa23.06■■□□□ 1.28
LIMS2-207ENST00000409808 DEFB132Q7Z7B7 95 aa23.06■■□□□ 1.28
LIMS2-207ENST00000409808 NSUN7Q8NE18 718 aaKnown RBP23.06■■□□□ 1.28
LIMS2-207ENST00000409808 ZNF396Q96N95 335 aaPredicted RBP23.06■■□□□ 1.28
LIMS2-207ENST00000409808 MYH13Q9UKX3 1938 aa23.06■■□□□ 1.28
LIMS2-207ENST00000409808 ZNF75DP51815 510 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 C17orf53Q8N3J3 647 aaPredicted RBP23.05■■□□□ 1.28
LIMS2-207ENST00000409808 AIDAQ96BJ3 306 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 ARMT1Q9H993 441 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 RAI14Q9P0K7 980 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 DENND2AQ9ULE3 1009 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 PARP3Q9Y6F1 533 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 XDHP47989 1333 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 E7EWF7 191 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 MBD4O95243 580 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 CDC25BP30305 580 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 HOXA10P31260 410 aaPredicted RBP23.05■■□□□ 1.28
LIMS2-207ENST00000409808 FBXL16Q8N461 479 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 MIGA1Q8NAN2 632 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 ZNF274Q96GC6 653 aaPredicted RBP23.05■■□□□ 1.28
LIMS2-207ENST00000409808 STRBPQ96SI9 672 aaKnown RBP23.05■■□□□ 1.28
LIMS2-207ENST00000409808 LRRC2Q9BYS8 371 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 NRXN2Q9P2S2 1712 aa23.05■■□□□ 1.28
LIMS2-207ENST00000409808 APPP05067 770 aa23.04■■□□□ 1.28
LIMS2-207ENST00000409808 ADGRA1Q86SQ6 560 aa23.04■■□□□ 1.28
LIMS2-207ENST00000409808 BRIP1Q9BX63 1249 aa23.04■■□□□ 1.28
LIMS2-207ENST00000409808 ADD1P35611 737 aaKnown RBP23.04■■□□□ 1.28
LIMS2-207ENST00000409808 DDX11Q96FC9 970 aa23.04■■□□□ 1.28
LIMS2-207ENST00000409808 TRIM5Q9C035 493 aa23.04■■□□□ 1.28
LIMS2-207ENST00000409808 LEMD3Q9Y2U8 911 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms