RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 TBRG1Q3YBR2 411 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 TXNDC2Q86VQ3 553 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 SMAP1Q8IYB5 467 aaPredicted RBP4.59□□□□□ -1.67
RGPD1-202ENST00000409776 SH3KBP1Q96B97 665 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 ZCWPW1Q9H0M4 648 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 SPARCP09486 303 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 POLE2P56282 527 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 STIM1Q13586 685 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CCDC14Q49A88 953 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 TRAF7Q6Q0C0 670 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CWC27Q6UX04 472 aaKnown RBP4.59□□□□□ -1.67
RGPD1-202ENST00000409776 BHMT2Q9H2M3 363 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 PRKRIP1Q9H875 184 aaPredicted RBP4.59□□□□□ -1.67
RGPD1-202ENST00000409776 ZNF652Q9Y2D9 606 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 HAUS5O94927 633 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 BAG3O95817 575 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 SSTP61278 116 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 OCA2Q04671 838 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 SPATA1Q5VX52 437 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 KRBA2Q6ZNG9 492 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 STK32CQ86UX6 486 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 PASD1Q8IV76 773 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 ARFGAP2Q8N6H7 521 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 HOOK2Q96ED9 719 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 VPS16Q9H269 839 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 TMA7Q9Y2S6 64 aaKnown RBP4.59□□□□□ -1.67
RGPD1-202ENST00000409776 TRAK2O60296 914 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 DAB1O75553 588 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 ARF4P18085 180 aaPredicted RBP4.59□□□□□ -1.67
RGPD1-202ENST00000409776 EEF1GP26641 437 aaKnown RBP4.59□□□□□ -1.67
RGPD1-202ENST00000409776 LIG3P49916 1009 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 STX1BP61266 288 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CEP78Q5JTW2 689 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 LARP1Q6PKG0 1096 aaKnown RBP4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CCDC186Q7Z3E2 898 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CCDC25Q86WR0 208 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 NEK11Q8NG66 645 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 SPOCK3Q9BQ16 436 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CCDC90BQ9GZT6 254 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CTNNA3Q9UI47 895 aa4.59□□□□□ -1.67
RGPD1-202ENST00000409776 CYP19A1P11511 503 aaPredicted RBP4.59□□□□□ -1.68
RGPD1-202ENST00000409776 DDIT3P35638 169 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 EIF2S3LQ2VIR3 472 aaKnown RBP4.59□□□□□ -1.68
RGPD1-202ENST00000409776 BZW1Q7L1Q6 419 aaKnown RBP4.59□□□□□ -1.68
RGPD1-202ENST00000409776 CCHCR1Q8TD31 782 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 CLUAP1Q96AJ1 413 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 GDAP1L1Q96MZ0 367 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 TMOD4Q9NZQ9 345 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 PNMA2Q9UL42 364 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 SCAF8Q9UPN6 1271 aaKnown RBP4.59□□□□□ -1.68
RGPD1-202ENST00000409776 STK38LQ9Y2H1 464 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 ORC6Q9Y5N6 252 aa4.59□□□□□ -1.68
RGPD1-202ENST00000409776 GOLGA8MH3BSY2 632 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 DNAJA1P31689 397 aaKnown RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SNX16P57768 344 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PPP4R3AQ6IN85 833 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 FAM9CQ8IZT9 166 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 FERMT1Q9BQL6 677 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 TUFT1Q9NNX1 390 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 CHCHD3Q9NX63 227 aaKnown RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 MID2Q9UJV3 735 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 CLUP10909 449 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SLC8A3P57103 927 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 WASHC5Q12768 1159 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 LAMC2Q13753 1193 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SRRM1Q8IYB3 904 aaKnown RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 GATAD2BQ8WXI9 593 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 UBA5Q9GZZ9 404 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 ECT2Q9H8V3 914 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PARVBQ9HBI1 364 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 TXLNGQ9NUQ3 528 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PPP1R15AO75807 674 aaPredicted RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PDE6AP16499 860 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 FGFR2P21802 821 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 ANKRD1Q15327 319 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SAFBQ15424 915 aaKnown RBP eCLIP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 TAF12Q16514 161 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SMYD5Q6GMV2 418 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 CPLX2Q6PUV4 134 aaKnown RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 DPF1Q92782 380 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 ABCG4Q9H172 646 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PCDHGA3Q9Y5H0 932 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 ARHGAP10A1A4S6 786 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 MCF2LO15068 1137 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 INPP5BP32019 993 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 GGT6Q6P531 493 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 OLFML1Q6UWY5 402 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 B4GALNT4Q76KP1 1039 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 JPH4Q96JJ6 628 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 MTA3Q9BTC8 594 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 FAM129AQ9BZQ8 928 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 RBSNQ9H1K0 784 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 ZWILCHQ9H900 591 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 GOLGA8SH3BPF8 625 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PLS3P13797 630 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 CCNCP24863 283 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PPIDQ08752 370 aaKnown RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 LRMPQ12912 555 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SEPT2Q15019 361 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms