RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 WNT10BO00744 389 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 GPAA1O43292 621 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 PRKAB2O43741 272 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 LDHCP07864 332 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 EPHX2P34913 555 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 LRRFIP1Q32MZ4 808 aaKnown RBP16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 CDC42EP5Q6NZY7 148 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 SLF2Q8IX21 1173 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 AIDAQ96BJ3 306 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 RIOK1Q9BRS2 568 aaKnown RBP16.98■□□□□ 0.31
CHRNA1-204ENST00000409323 RFX7Q2KHR2 1363 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 GPR75-ASB3A0A0A6YYF3 556 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 SLC4A8Q2Y0W8 1093 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 VPS53Q5VIR6 699 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 SDR42E1Q8WUS8 393 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 USP40Q9NVE5 1235 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 ECM29Q5VYK3 1845 aa16.97■□□□□ 0.31
CHRNA1-204ENST00000409323 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 RHBDL3P58872 404 aa16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 PICALMQ13492 652 aa16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 MCMDC2Q4G0Z9 681 aa16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 FAM163AQ96GL9 167 aaPredicted RBP16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 POLR2AP24928 1970 aaKnown RBP16.96■□□□□ 0.31
CHRNA1-204ENST00000409323 SCN4AP35499 1836 aa16.96■□□□□ 0.3
CHRNA1-204ENST00000409323 HIP1O00291 1037 aa16.95■□□□□ 0.3
CHRNA1-204ENST00000409323 NFIAQ12857 509 aa16.95■□□□□ 0.3
CHRNA1-204ENST00000409323 ESYT1Q9BSJ8 1104 aa16.95■□□□□ 0.3
CHRNA1-204ENST00000409323 TAF1DQ9H5J8 278 aaPredicted RBP16.95■□□□□ 0.3
CHRNA1-204ENST00000409323 HELLSQ9NRZ9 838 aa16.95■□□□□ 0.3
CHRNA1-204ENST00000409323 ADARB2Q9NS39 739 aaKnown RBP16.95■□□□□ 0.3
CHRNA1-204ENST00000409323 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 BAG3O95817 575 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 TCP10Q12799 353 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 C8orf34Q49A92 452 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 TEX11Q8IYF3 940 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 ZBED3Q96IU2 234 aaPredicted RBP16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 STRBPQ96SI9 672 aaKnown RBP16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 ZNF70Q9UC06 446 aaPredicted RBP16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 SGSM2O43147 1006 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 ANGEL2Q5VTE6 544 aaKnown RBP16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 CASC1Q6TDU7 716 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 DLK2Q6UY11 383 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 MAPKAPK5Q8IW41 473 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 MRIQ9BWK5 157 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 DDX4Q9NQI0 724 aaKnown RBP16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 GGA3Q9NZ52 723 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 SLC4A4Q9Y6R1 1079 aa16.94■□□□□ 0.3
CHRNA1-204ENST00000409323 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 IQCA1LA6NCM1 817 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 SEC24BO95487 1268 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 APPP05067 770 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 YY1P25490 414 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 ZFPM1Q8IX07 1006 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 MTMR14Q8NCE2 650 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 RUFY2Q8WXA3 655 aa16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
CHRNA1-204ENST00000409323 FOXP2O15409 715 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 MYO1BO43795 1136 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 VEGFAP15692 232 aaPredicted RBP16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 USP5P45974 858 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 PPP4CP60510 307 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 PTH1RQ03431 593 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 EVX2Q03828 476 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 SPDYE2Q495Y8 402 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
CHRNA1-204ENST00000409323 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 PRAMEF18Q5VWM3 479 aa16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 CRNKL1Q9BZJ0 848 aaKnown RBP16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 NAV1Q8NEY1 1877 aa16.91■□□□□ 0.3
CHRNA1-204ENST00000409323 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
CHRNA1-204ENST00000409323 CDAN1Q8IWY9 1227 aa16.9■□□□□ 0.3
CHRNA1-204ENST00000409323 STK11IPQ8N1F8 1099 aa16.9■□□□□ 0.3
CHRNA1-204ENST00000409323 TMOD2Q9NZR1 351 aa16.9■□□□□ 0.3
CHRNA1-204ENST00000409323 FAM198AQ9UFP1 575 aa16.9■□□□□ 0.3
CHRNA1-204ENST00000409323 FLT1P17948 1338 aa16.9■□□□□ 0.3
CHRNA1-204ENST00000409323 MYH1P12882 1939 aa16.9■□□□□ 0.3
CHRNA1-204ENST00000409323 CYP2D7A0A087X1C5 515 aa16.89■□□□□ 0.3
CHRNA1-204ENST00000409323 GSG1L2A8MUP6 293 aa16.89■□□□□ 0.3
CHRNA1-204ENST00000409323 SLURP2P0DP57 97 aa16.89■□□□□ 0.3
CHRNA1-204ENST00000409323 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.3
CHRNA1-204ENST00000409323 PLCG2P16885 1265 aa16.89■□□□□ 0.3
CHRNA1-204ENST00000409323 USP50Q70EL3 339 aaPredicted RBP16.89■□□□□ 0.3
CHRNA1-204ENST00000409323 RAD50Q92878 1312 aa16.89■□□□□ 0.29
CHRNA1-204ENST00000409323 IGSF3O75054 1194 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms